Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_1099 and Psyr_1100 overlap by 16 nucleotidesPsyr_1100 and Psyr_1101 are separated by 170 nucleotidesPsyr_1101 and Psyr_1102 are separated by 695 nucleotidesPsyr_1102 and Psyr_1103 are separated by 98 nucleotides Psyr_1099: Psyr_1099 - Response regulator receiver, at 1,244,311 to 1,244,700 _1099 Psyr_1100: Psyr_1100 - PAS/PAC sensor signal transduction histidine kinase, at 1,244,685 to 1,246,415 _1100 Psyr_1101: Psyr_1101 - Helix-turn-helix, Fis-type, at 1,246,586 to 1,248,094 _1101 Psyr_1102: Psyr_1102 - conserved hypothetical protein, at 1,248,790 to 1,249,146 _1102 Psyr_1103: Psyr_1103 - Protein of unknown function DUF454, at 1,249,245 to 1,249,703 _1103
Group Condition Psyr_1099 Psyr_1100 Psyr_1101 Psyr_1102 Psyr_1103
stress KB with Theaflavin 10 mM -0.5 -0.0 -0.3 -0.1 -0.3
stress KB with Berberine 250 ug/ml +0.1 +0.2 -0.3 -0.5 -0.7
stress KB with Cimicifugoside H1 10 mM -0.3 -0.2 -0.2 -0.2 -0.3
aphid library passed through aphids in food, 72 hours -0.2 -0.3 -0.2 -0.1 -0.3
stress KB with Mitomycin C 0.625 ug/ml -0.4 +0.4 -0.4 -0.7 -0.0
stress KB with capsaicin 0.125 mg/ml -0.2 -0.1 +0.1 -0.3 -0.4
stress KB with Novobiocin 250 ug/ml +0.2 -0.1 -0.3 -0.3 -0.4
stress KB with Trimethoprim 125 ug/ml +0.2 +0.0 -0.3 -0.1 -0.6
stress KB with Benzalkonium Chloride 6.25 ug/ml +0.1 +0.3 -0.6 -0.6 -0.0
carbon source Citric Acid (C) -0.2 +0.2 -0.4 +0.0 -0.4
stress KB with Isovanillin 10 mM -0.4 -0.2 +0.2 +0.0 -0.3
stress KB with Acacetin 10 mM -0.3 -0.1 -0.2 +0.3 -0.4
carbon source L-Malic (C) -0.1 -0.1 -0.2 +0.4 -0.5
aphid library passed through aphids in food, 72 hours +0.0 -0.3 -0.1 +0.4 -0.4
carbon source 4-hydroxybutyric (C) -0.1 +0.2 -0.3 +0.1 -0.3
in planta apoplastic; Lima bean -0.3 -0.2 -0.5 +0.4 +0.2
aphid library passed through aphids in food, 72 hours +0.2 +0.2 +0.1 +0.4 -0.9
in planta epiphytic; Green bean +0.2 +0.1 -0.1 +0.3 -0.5
in planta apoplastic; Green bean; 13 days +0.2 +0.5 +0.4 -0.5 -0.4
stress KB with Fusaric 250 ug/ml -0.2 +0.1 -0.4 +0.2 +0.5
in planta apoplastic, sonication recovery; Green bean -0.0 +0.2 +0.3 -0.5 +0.3
carbon source Sucrose (C) +0.4 +0.3 -0.3 +0.1 -0.1
in planta apoplastic; Pepper +0.2 -0.3 -0.3 +0.5 +0.4
in planta apoplastic; Pepper +0.1 +0.0 -0.4 +0.4 +0.3
in planta apoplastic, sonication recovery; Green bean -0.1 +0.1 +0.4 -0.5 +0.5
in planta apoplastic, grinding recovery; Green bean +0.0 -0.4 +0.2 +0.1 +0.5
in planta apoplastic; Pepper -0.4 -0.2 +0.4 +0.6 +0.4
in planta apoplastic; Pepper -0.4 +0.0 +0.3 +0.5 +0.4
in planta epiphytic; Lima bean +0.4 +0.0 +0.4 +0.4 -0.3
stress DMSO +0.5 -0.0 +0.2 +0.1 +0.4
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