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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1082 and Psyr_1083 are separated by 5 nucleotides
Psyr_1083 and Psyr_1084 are separated by 393 nucleotides
Psyr_1084 and Psyr_1085 are separated by 583 nucleotides
Psyr_1085 and Psyr_1086 are separated by 156 nucleotides
Psyr_1082: Psyr_1082 - Glutaredoxin, at 1,223,955 to 1,224,305
_1082
Psyr_1083: Psyr_1083 - 37kDa nucleoid-associated bacterial protein, at 1,224,311 to 1,225,312
_1083
Psyr_1084: Psyr_1084 - Histone-like bacterial DNA-binding protein, at 1,225,706 to 1,225,987
_1084
Psyr_1085: Psyr_1085 - 23S rRNA m(6)A-1618 methyltransferase, at 1,226,571 to 1,227,557
_1085
Psyr_1086: Psyr_1086 - valyl-tRNA synthetase, at 1,227,714 to 1,230,560
_1086
Group
Condition
Psyr
_1082
Psyr
_1083
Psyr
_1084
Psyr
_1085
Psyr
_1086
in planta
apoplastic, grinding recovery; Green bean
+0.0
+0.2
N.D.
-1.8
N.D.
stress
KB with Mitomycin C 0.625 ug/ml
-0.1
-0.4
N.D.
-0.8
N.D.
aphid
library passed through aphids in food, 72 hours
+0.2
-0.6
N.D.
-0.5
N.D.
aphid
library passed through aphids in food, 24 hours
-0.2
-0.2
N.D.
-0.4
N.D.
aphid
library passed through aphids in food, 72 hours
+0.1
-0.7
N.D.
-0.1
N.D.
stress
MBOA 0.5 mM
-0.3
+0.1
N.D.
-0.4
N.D.
aphid
library passed through aphids in food, 72 hours
-0.2
-0.3
N.D.
+0.1
N.D.
stress
KB with Nitrofurantoin 125 ug/ml
-0.2
-0.3
N.D.
+0.3
N.D.
stress
KB with Nalidixic 12.5 ug/ml
-0.3
-0.2
N.D.
+0.3
N.D.
stress
KB with Lupeol 10 mM
-0.2
-0.2
N.D.
+0.3
N.D.
stress
KB with Levodopa 10 mM
-0.3
+0.2
N.D.
+0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.2
N.D.
+0.3
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-0.2
N.D.
+0.5
N.D.
stress
KB with Conessine 10 mM
+0.1
-0.2
N.D.
+0.7
N.D.
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.1
+0.1
N.D.
+0.6
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.7
+0.3
N.D.
-0.3
N.D.
carbon source
Fumaric (C)
+0.2
-0.1
N.D.
+0.5
N.D.
in planta
apoplastic; Green bean; 6 days
+0.2
+0.2
N.D.
+0.4
N.D.
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.1
+0.2
N.D.
+0.5
N.D.
stress
KB with Nonanoic 10 mM
+0.1
+0.1
N.D.
+0.6
N.D.
stress
KB with Plumbagin 10 mM
+0.2
+0.1
N.D.
+0.7
N.D.
stress
KB with Avocatin A 10 mM
+0.3
+0.0
N.D.
+0.6
N.D.
carbon source
D-Gluconic (C)
+0.1
+0.2
N.D.
+0.7
N.D.
carbon source
Succinic Acid (C)
+0.1
+0.1
N.D.
+0.9
N.D.
carbon source
Glycerol (C)
+0.1
+0.4
N.D.
+0.6
N.D.
in planta
apoplastic, sonication recovery; Green bean
+0.7
+0.4
N.D.
+0.0
N.D.
carbon source
Sucrose (C)
+0.1
+0.4
N.D.
+0.8
N.D.
carbon source
Citric Acid (C)
+0.2
+0.6
N.D.
+0.5
N.D.
carbon source
L-Proline (C)
+0.4
+0.3
N.D.
+0.7
N.D.
carbon source
D-Mannose (C)
+0.5
+0.4
N.D.
+0.8
N.D.
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