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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1058 and Psyr_1059 are separated by 26 nucleotides
Psyr_1059 and Psyr_1060 overlap by 4 nucleotides
Psyr_1060 and Psyr_1061 are separated by 2 nucleotides
Psyr_1061 and Psyr_1062 are separated by 40 nucleotides
Psyr_1058: Psyr_1058 - Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis, at 1,197,396 to 1,199,006
_1058
Psyr_1059: Psyr_1059 - alginate export porin, at 1,199,033 to 1,200,517
_1059
Psyr_1060: Psyr_1060 - Sel1-like repeat protein, at 1,200,514 to 1,201,926
_1060
Psyr_1061: Psyr_1061 - alginate biosynthesis protein Alg44, at 1,201,929 to 1,203,101
_1061
Psyr_1062: Psyr_1062 - alginate biosynthesis protein Alg8, at 1,203,142 to 1,204,623
_1062
Group
Condition
Psyr
_1058
Psyr
_1059
Psyr
_1060
Psyr
_1061
Psyr
_1062
in planta
apoplastic; Lima bean
-1.9
-1.5
-1.0
-1.5
-1.2
in planta
apoplastic; Lima bean
-1.6
-1.3
-1.2
-1.8
-1.2
in planta
apoplastic; Lima bean
-1.4
-1.2
-1.4
-1.1
-1.5
in planta
apoplastic; Lima bean
-1.6
-0.9
-1.3
-1.3
-1.1
in planta
apoplastic; Lima bean
-1.1
-1.2
-1.4
-0.8
-1.4
in planta
apoplastic; Lima bean
-1.2
-1.0
-0.9
-1.1
-0.9
in planta
apoplastic; Green bean; 6 days
-0.9
-0.5
-0.9
-1.7
-0.5
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.9
-0.6
-1.1
-1.1
in planta
apoplastic, sonication recovery; Green bean
-0.6
-0.6
-1.0
-1.0
-0.6
in planta
apoplastic, sonication recovery; Green bean
-0.6
-0.5
-0.8
-0.9
-0.6
in planta
apoplastic; Green bean; 13 days
-0.6
-0.4
-1.1
-0.7
-0.6
in planta
apoplastic, chopping recovery; Green bean
-0.6
-0.7
-0.3
-0.6
-0.6
in planta
apoplastic; Green bean; 6 days
-0.8
-0.3
-0.6
-0.5
-0.4
in planta
apoplastic, grinding recovery; Green bean
-0.3
-0.8
-0.4
-0.3
-0.9
in planta
apoplastic; Pepper
-0.7
-0.9
-0.4
-0.3
-0.4
in planta
apoplastic; Pepper
-0.5
-0.8
-0.3
-0.4
-0.4
in planta
apoplastic; Pepper
-0.5
-0.7
-0.2
-0.5
-0.5
carbon source
L-Malic (C)
-0.5
-0.1
+0.0
-0.7
-0.4
in planta
apoplastic; Pepper
-0.1
-0.5
-0.5
-0.2
-0.2
in planta
apoplastic; Pepper
-0.5
-0.4
-0.1
-0.2
-0.3
stress
KB with Plumbagin 10 mM
-0.4
-0.1
-0.3
-0.4
-0.1
in planta
apoplastic; Pepper
-0.2
-0.5
-0.1
-0.2
-0.2
stress
KB with Erythromycin 25 ug/ml
-0.4
-0.0
+0.2
-0.1
-0.3
in planta
epiphytic; Lima bean
+0.1
-0.1
-0.2
-0.6
+0.2
aphid
library passed through aphids in food, 72 hours
+0.3
+0.2
+0.2
-0.6
+0.1
stress
KB with Ampicillin 15.6 ug/ml
-0.0
+0.3
+0.4
-0.3
-0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.2
+0.3
+0.5
-0.2
-0.1
in planta
Green bean; epiphytic
+0.4
+0.1
+0.1
+0.5
-0.0
carbon source
Sucrose (C)
+0.4
+0.4
+0.3
+0.1
+0.4
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+0.7
+0.3
+0.3
+0.6
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