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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1023 and Psyr_1024 are separated by 206 nucleotides
Psyr_1024 and Psyr_1025 are separated by 111 nucleotides
Psyr_1025 and Psyr_1026 are separated by 213 nucleotides
Psyr_1026 and Psyr_1027 are separated by 229 nucleotides
Psyr_1023: Psyr_1023 - conserved hypothetical protein, at 1,154,230 to 1,154,835
_1023
Psyr_1024: Psyr_1024 - Flavodoxin/nitric oxide synthase, at 1,155,042 to 1,155,494
_1024
Psyr_1025: Psyr_1025 - Short-chain dehydrogenase/reductase SDR, at 1,155,606 to 1,156,517
_1025
Psyr_1026: Psyr_1026 - hypothetical protein, at 1,156,731 to 1,157,288
_1026
Psyr_1027: Psyr_1027 - conserved hypothetical protein, at 1,157,518 to 1,158,321
_1027
Group
Condition
Psyr
_1023
Psyr
_1024
Psyr
_1025
Psyr
_1026
Psyr
_1027
stress
KB with Plumbagin 10 mM
-0.2
-1.8
-0.3
+0.1
+0.0
in planta
apoplastic, grinding recovery; Green bean
-0.1
-0.9
-0.8
-0.1
-0.2
stress
KB with Paeonol 10 mM
-0.2
-1.5
+0.1
+0.0
+0.3
in planta
apoplastic; Green bean; 13 days
-0.6
+0.5
-0.5
-0.1
-0.5
stress
KB with Ginkgolide A 10 mM
+0.3
-1.4
-0.1
-0.0
-0.0
in planta
apoplastic; Lima bean
-0.2
-0.7
-0.2
+0.2
-0.3
stress
KB with Biochanin a diacetate 10 mM
-0.3
-1.2
+0.2
+0.0
+0.1
in planta
apoplastic; Lima bean
+0.1
-1.2
-0.0
+0.3
-0.2
in planta
epiphytic; Green bean
+0.4
-0.8
+0.1
-0.1
-0.5
stress
KB with Rifampicin 0.1 mg/ml
-0.5
+0.5
-0.3
+0.0
-0.4
stress
KB with 4-hydroxychalcone 10 mM
-0.3
-0.8
+0.2
+0.2
+0.1
carbon source
Sucrose (C)
-0.3
+0.4
+0.3
-0.3
-0.5
stress
KB with Mitomycin C 0.625 ug/ml
-0.5
-1.2
+0.4
+0.6
+0.7
in planta
epiphytic; Lima bean
-0.3
+0.4
-0.5
+0.2
+0.2
stress
KB with L-alliin 10 mM
+0.6
-0.8
+0.1
-0.1
+0.2
in planta
epiphytic; Lima bean
+0.6
-1.0
+0.1
+0.2
+0.1
stress
KB with Quercetin 360 ug/ml
+0.5
-0.6
+0.1
-0.1
+0.3
stress
KB with Erythromycin 25 ug/ml
-0.5
+0.7
+0.2
-0.2
+0.1
stress
KB with Palmatine chloride 10 mM
+0.6
-0.7
+0.4
-0.1
+0.3
in planta
apoplastic; Pepper
-0.2
-0.4
+0.3
+0.3
+0.4
in planta
apoplastic, sonication recovery; Green bean
+0.5
+0.3
-0.5
+0.3
-0.0
in planta
apoplastic; Pepper
-0.6
+0.1
-0.0
+0.3
+0.8
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
-0.6
+0.5
+0.7
+0.2
carbon source
Fumaric (C)
+0.1
+0.5
+0.3
+0.3
-0.4
carbon source
D-Gluconic (C)
+0.2
+0.9
+0.2
-0.1
-0.3
aphid
library passed through aphids in food, 72 hours
+0.5
-0.2
+0.3
+0.4
-0.2
in planta
epiphytic; Green bean
+0.1
+0.6
-0.5
-0.0
+0.7
in planta
epiphytic; Green bean
+0.6
+0.3
-0.2
+0.1
+0.4
carbon source
Succinic Acid (C)
+0.0
+1.2
+0.3
+0.1
-0.2
in planta
apoplastic; Pepper
-0.0
+1.4
+0.0
+0.3
-0.2
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