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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0814 and Psyr_0815 are separated by 248 nucleotides
Psyr_0815 and Psyr_0816 are separated by 354 nucleotides
Psyr_0816 and Psyr_0817 are separated by 203 nucleotides
Psyr_0817 and Psyr_0818 are separated by 15 nucleotides
Psyr_0814: Psyr_0814 - Protein of unknown function DUF124, at 918,412 to 919,287
_0814
Psyr_0815: Psyr_0815 - nicotinate-nucleotide pyrophosphorylase (carboxylating), at 919,536 to 920,384
_0815
Psyr_0816: Psyr_0816 - conserved hypothetical protein, at 920,739 to 922,994
_0816
Psyr_0817: Psyr_0817 - N-acetylmuramoyl-L-alanine amidase, family 2, at 923,198 to 923,746
_0817
Psyr_0818: Psyr_0818 - ampE protein, at 923,762 to 924,598
_0818
Group
Condition
Psyr
_0814
Psyr
_0815
Psyr
_0816
Psyr
_0817
Psyr
_0818
carbon source
L-Malic (C)
-0.2
-2.7
-0.1
-0.8
-0.4
carbon source
D-Mannose (C)
+0.1
-3.1
+0.2
+0.0
+0.1
carbon source
Sucrose (C)
+0.1
-2.9
+0.1
-0.3
+0.5
in planta
apoplastic; Lima bean
-0.2
-0.4
-0.1
-1.0
-0.4
in planta
Green bean; epiphytic
+0.1
-0.4
-0.0
-1.3
-0.4
in planta
apoplastic, chopping recovery; Green bean
+0.3
-0.9
-0.0
-0.3
-1.0
carbon source
Citric Acid (C)
-0.2
-1.1
+0.1
-0.4
-0.4
carbon source
Fumaric (C)
+0.0
-2.3
-0.1
+0.1
+0.4
in planta
apoplastic; Pepper
+0.0
-0.4
-0.1
-0.2
-1.3
in planta
apoplastic; Green bean; 6 days
-0.3
-1.3
-0.3
-0.3
+0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.0
-0.1
+0.2
-1.3
-0.7
carbon source
D-Gluconic (C)
-0.1
-2.5
+0.2
+0.5
-0.0
carbon source
Succinic Acid (C)
+0.2
-2.1
+0.1
-0.0
+0.1
in planta
apoplastic; Green bean; 6 days
-0.1
-1.2
-0.3
-0.2
+0.4
carbon source
Citric Acid (C)
+0.4
-1.6
+0.1
-0.4
+0.3
carbon source
Glycerol (C)
+0.2
-1.9
+0.1
-0.0
+0.4
stress
KB with Totarol 10 mM
-0.3
-0.2
+0.1
-0.9
+0.3
carbon source
4-Aminobutyric (C)
+0.1
-1.3
+0.0
+0.2
+0.2
in planta
epiphytic; Green bean
+0.1
-0.2
+0.1
-1.1
+0.6
in planta
epiphytic; Lima bean
-0.3
-0.8
-0.2
+0.3
+0.5
in planta
epiphytic; Green bean
-0.3
+0.5
+0.1
-1.0
+0.4
stress
KB with Avocadyne 10 mM
-0.1
-0.1
+0.2
-0.7
+0.7
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.7
-0.0
+0.5
+0.5
in planta
apoplastic; Pepper
+0.3
-0.6
-0.3
+0.6
+0.3
aphid
library passed through aphids in food, 72 hours
+0.3
-0.3
+0.6
-0.5
+0.3
stress
KB with Mitomycin C 0.625 ug/ml
+0.3
+0.1
-0.1
+0.8
-0.7
in planta
apoplastic; Green bean; 13 days
+0.7
-0.2
-0.2
-0.2
+0.6
carbon source
L-Proline (C)
+0.3
-0.8
+0.0
+0.6
+0.6
in planta
apoplastic, sonication recovery; Green bean
-0.2
-0.2
+0.3
+1.2
+0.3
aphid
library passed through aphids in food, 72 hours
+0.3
-0.4
+0.7
-0.2
+1.2
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