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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0801 and Psyr_0802 are separated by 54 nucleotides
Psyr_0802 and Psyr_0803 are separated by 66 nucleotides
Psyr_0803 and Psyr_0804 overlap by 8 nucleotides
Psyr_0804 and Psyr_0805 overlap by 8 nucleotides
Psyr_0801: Psyr_0801 - conserved hypothetical protein, at 906,688 to 907,686
_0801
Psyr_0802: Psyr_0802 - Peptidase S1, chymotrypsin, at 907,741 to 908,880
_0802
Psyr_0803: Psyr_0803 - conserved hypothetical protein, at 908,947 to 910,080
_0803
Psyr_0804: Psyr_0804 - conserved hypothetical protein, at 910,073 to 910,831
_0804
Psyr_0805: Psyr_0805 - conserved hypothetical protein, at 910,824 to 911,918
_0805
Group
Condition
Psyr
_0801
Psyr
_0802
Psyr
_0803
Psyr
_0804
Psyr
_0805
no stress control
no stress control
-0.3
-0.1
-0.3
-0.3
-0.1
stress
KB with Mitomycin C 0.625 ug/ml
-0.0
-0.3
-0.3
+0.2
-0.3
stress
MBOA 0.5 mM
-0.3
-0.2
-0.2
+0.1
-0.0
stress
KB with Plumbagin 10 mM
-0.2
-0.3
+0.2
-0.3
-0.1
in planta
apoplastic, sonication recovery; Green bean
-0.4
-0.2
+0.2
-0.2
+0.1
stress
MBOA 1.2 mM
-0.4
-0.1
-0.1
-0.2
+0.2
in planta
apoplastic; Green bean; 13 days
+0.2
-0.2
-0.3
-0.1
-0.3
carbon source
Sucrose (C)
+0.1
-0.1
-0.2
-0.1
-0.3
in planta
Green bean; epiphytic
-0.1
-0.2
+0.2
-0.3
-0.1
stress
KB with Acriflavine 7.75 ug/ml
+0.0
+0.2
-0.0
-0.3
-0.3
stress
KB with Palmatine chloride 10 mM
+0.1
-0.1
+0.3
-0.3
-0.2
stress
KB with Nitrofurantoin 0.25 mg/ml
-0.3
+0.2
+0.2
-0.1
-0.1
stress
KB with Lupeol 10 mM
+0.1
-0.1
+0.1
-0.3
+0.1
stress
KB with Acridine orange 62.5 ug/ml
+0.1
-0.0
-0.2
+0.3
-0.2
in planta
epiphytic; Green bean
-0.4
+0.2
+0.0
-0.0
+0.2
stress
KB with Carnitine (Dl) Hydrochloride 10 mM
-0.1
-0.0
+0.2
-0.3
+0.2
stress
KB with Methanol 5 vol%
-0.0
-0.0
+0.1
+0.3
-0.3
carbon source
Citric Acid (C)
-0.3
-0.1
-0.2
+0.5
+0.1
stress
KB with Avocatin A 10 mM
+0.0
+0.1
+0.4
-0.4
+0.0
carbon source
a-Ketoglutaric (C)
+0.3
+0.2
-0.1
-0.3
+0.1
stress
KB with 4-hydroxychalcone 10 mM
+0.2
-0.2
+0.3
-0.2
+0.0
stress
KB with Avocadene 10 mM
+0.2
+0.1
-0.1
+0.3
-0.2
in planta
apoplastic; Lima bean
-0.1
-0.2
+0.2
+0.3
+0.1
stress
KB with Khayasin C 10 mM
+0.3
+0.2
+0.0
+0.1
-0.2
stress
KB with Pterin-6-Carboxylic Acid 10 mM
+0.3
+0.0
+0.0
+0.3
-0.2
in planta
apoplastic; Pepper
+0.2
+0.0
-0.1
+0.1
+0.3
in planta
apoplastic; Pepper
+0.1
+0.2
-0.1
+0.2
+0.3
in planta
epiphytic; Green bean
-0.1
+0.2
+0.2
+0.0
+0.4
stress
KB with Paclitaxel 10 mM
+0.2
-0.0
+0.4
+0.0
+0.1
in planta
epiphytic; Lima bean
+0.0
+0.4
+0.3
+0.2
+0.0
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