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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0759 and Psyr_0760 are separated by 30 nucleotides
Psyr_0760 and Psyr_0761 overlap by 4 nucleotides
Psyr_0761 and Psyr_0762 are separated by 21 nucleotides
Psyr_0762 and Psyr_0763 are separated by 167 nucleotides
Psyr_0759: Psyr_0759 - carbohydrate ABC transporter ATP-binding protein, CUT1 family, at 864,581 to 865,723
_0759
Psyr_0760: Psyr_0760 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 865,754 to 866,596
_0760
Psyr_0761: Psyr_0761 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 866,593 to 867,555
_0761
Psyr_0762: Psyr_0762 - carbohydrate ABC transporter substrate-binding protein, CUT1 family, at 867,577 to 868,851
_0762
Psyr_0763: Psyr_0763 - Porin, LamB type, at 869,019 to 870,596
_0763
Group
Condition
Psyr
_0759
Psyr
_0760
Psyr
_0761
Psyr
_0762
Psyr
_0763
carbon source
Sucrose (C)
-1.3
-1.1
-1.4
-1.1
+0.5
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.7
-0.4
-0.5
-0.3
in planta
apoplastic; Green bean; 6 days
-0.4
-0.5
-0.7
-0.4
-0.2
in planta
apoplastic; Green bean; 6 days
-0.5
-0.3
-0.7
-0.4
-0.3
in planta
apoplastic, grinding recovery; Green bean
-0.5
-0.2
-0.5
-0.3
-0.4
in planta
apoplastic, grinding recovery; Green bean
-0.4
-0.2
-0.3
-0.4
-0.4
in planta
apoplastic; Green bean; 13 days
-0.2
-0.2
-0.3
-0.2
-0.6
in planta
epiphytic; Lima bean
-0.1
-0.1
-0.5
-0.5
-0.2
in planta
apoplastic; Lima bean
-0.2
-0.2
-0.3
-0.3
-0.2
in planta
apoplastic; Pepper
-0.3
-0.4
-0.3
-0.1
-0.1
in planta
apoplastic, sonication recovery; Green bean
-0.3
-0.6
+0.1
+0.0
-0.3
carbon source
L-Malic (C)
-0.1
-0.4
-0.5
-0.1
+0.1
aphid
library passed through aphids in food, 72 hours
-0.2
-0.4
-0.3
-0.1
+0.1
in planta
apoplastic, sonication recovery; Green bean
-0.2
-0.4
+0.1
-0.1
-0.2
in planta
epiphytic; Green bean
-0.0
-0.1
-0.4
-0.2
+0.1
in planta
apoplastic; Pepper
-0.4
-0.3
+0.4
-0.3
-0.1
in planta
apoplastic; Lima bean
-0.1
-0.3
+0.0
-0.1
-0.3
carbon source
4-hydroxybutyric (C)
-0.2
-0.3
-0.1
+0.1
+0.0
in planta
apoplastic; Pepper
-0.3
-0.1
+0.4
-0.4
-0.1
stress
KB with Trimethoprim 125 ug/ml
+0.1
+0.1
-0.4
-0.1
-0.1
in planta
epiphytic; Green bean
+0.1
+0.1
-0.3
-0.2
+0.1
in planta
epiphytic; Lima bean
-0.0
+0.4
-0.2
-0.3
-0.1
carbon source
a-Ketoglutaric (C)
+0.2
+0.2
-0.3
-0.1
+0.0
stress
KB with Chloramphenicol 12.5 ug/ml
+0.1
+0.3
-0.2
-0.1
-0.1
stress
KB with Plumbagin 10 mM
-0.0
+0.2
+0.1
-0.3
+0.1
in planta
Green bean; epiphytic
+0.2
+0.2
-0.3
-0.1
+0.2
stress
KB with Harmol 10 mM
+0.2
+0.1
+0.3
+0.1
+0.0
stress
KB with Mitomycin C 0.625 ug/ml
+0.0
+0.2
+0.2
+0.6
-0.1
stress
KB with Acridine orange 62.5 ug/ml
+0.1
+0.3
+0.3
+0.6
+0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.2
+0.2
+0.4
+0.7
+0.0
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