Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0714 and Psyr_0715 are separated by 131 nucleotidesPsyr_0715 and Psyr_0716 overlap by 1 nucleotidesPsyr_0716 and Psyr_0717 overlap by 4 nucleotidesPsyr_0717 and Psyr_0718 are separated by 11 nucleotides Psyr_0714: Psyr_0714 - type IV pilus biogenesis protein, at 818,332 to 818,832 _0714 Psyr_0715: Psyr_0715 - pillin, putative, at 818,964 to 819,437 _0715 Psyr_0716: Psyr_0716 - type IV pilus assembly protein PilV, at 819,437 to 819,952 _0716 Psyr_0717: Psyr_0717 - type IV pilus assembly protein PilW, at 819,949 to 820,656 _0717 Psyr_0718: Psyr_0718 - type IV pilus assembly protein PilX, at 820,668 to 821,162 _0718
Group Condition Psyr_0714 Psyr_0715 Psyr_0716 Psyr_0717 Psyr_0718
in planta apoplastic; Green bean; 6 days -0.1 -0.2 -0.4 -0.5 -1.1
in planta apoplastic; Green bean; 6 days -0.0 -0.2 -0.3 -0.5 -0.6
in planta apoplastic; Pepper +0.0 -0.5 +0.0 -0.3 -0.7
aphid library passed through aphids in food, 72 hours -0.3 -0.2 -0.6 -0.4 -0.0
in planta apoplastic, sonication recovery; Green bean -0.4 -0.3 -0.1 +0.1 -0.7
aphid library passed through aphids in food, 24 hours +0.1 -0.4 -0.3 -0.3 -0.5
aphid library passed through aphids in food, 24 hours -0.0 -0.4 -0.4 -0.2 -0.2
aphid library passed through aphids in food, 24 hours +0.2 -0.3 -0.5 -0.3 -0.2
in planta apoplastic; Pepper +0.3 -0.5 +0.0 -0.2 -0.6
in planta apoplastic, sonication recovery; Green bean -0.2 -0.1 +0.0 +0.1 -0.8
aphid library passed through aphids in food, 72 hours -0.5 +0.3 +0.1 +0.3 -0.1
in planta epiphytic; Lima bean +0.1 -0.4 -0.2 +0.2 +0.5
in planta epiphytic; Green bean -0.0 +0.2 -0.1 +0.1 +0.7
in planta apoplastic, grinding recovery; Green bean +0.2 +0.6 +0.3 +0.5 -0.7
stress KB with Acriflavine 7.75 ug/ml -0.1 -0.0 +0.5 +0.2 +0.5
carbon source Sucrose (C) -0.2 +0.2 +0.6 +0.1 +0.3
carbon source Citric Acid (C) -0.1 +0.3 +0.1 +0.2 +0.6
stress KB with Novobiocin 250 ug/ml +0.0 +0.2 +0.4 +0.2 +0.3
carbon source D-Gluconic (C) +0.0 +0.5 +0.1 +0.2 +0.4
carbon source Succinic Acid (C) -0.1 +0.5 +0.3 +0.1 +0.4
in planta apoplastic, grinding recovery; Green bean -0.1 +0.7 +0.1 +0.4 +0.1
in planta epiphytic; Green bean +0.3 +0.0 +0.4 -0.0 +0.5
carbon source Glycerol (C) +0.1 +0.5 +0.4 +0.2 +0.1
carbon source 4-Aminobutyric (C) +0.2 +0.4 +0.2 +0.1 +0.5
carbon source 4-hydroxybutyric (C) -0.1 +0.5 +0.3 +0.3 +0.4
in planta apoplastic; Pepper +0.1 +0.4 +0.3 +0.3 +0.4
in planta apoplastic; Pepper +0.0 +0.4 +0.3 +0.4 +0.5
stress KB with Berberine 250 ug/ml -0.1 +0.2 +0.3 +0.3 +1.0
carbon source D-Mannose (C) +0.1 +0.7 +0.1 +0.3 +1.1
stress KB with Erythromycin 25 ug/ml +0.1 +0.4 +0.7 +0.5 +0.9
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