Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0674 and Psyr_0675 are separated by 32 nucleotidesPsyr_0675 and Psyr_0676 are separated by 94 nucleotidesPsyr_0676 and Psyr_0677 are separated by 186 nucleotidesPsyr_0677 and Psyr_0678 are separated by 111 nucleotides Psyr_0674: Psyr_0674 - Protein of unknown function UPF0029, at 764,573 to 765,166 _0674 Psyr_0675: Psyr_0675 - transcriptional regulator, TetR family, at 765,199 to 765,861 _0675 Psyr_0676: Psyr_0676 - Xanthine/uracil permease family, at 765,956 to 767,353 _0676 Psyr_0677: Psyr_0677 - transcriptional regulator, LysR family, at 767,540 to 768,460 _0677 Psyr_0678: Psyr_0678 - Aminotransferase class-III, at 768,572 to 769,918 _0678
Group Condition Psyr_0674 Psyr_0675 Psyr_0676 Psyr_0677 Psyr_0678
in planta apoplastic; Lima bean -2.4 -0.1 +0.0 -0.0 +0.2
in planta apoplastic; Lima bean -1.3 -0.3 -0.1 -0.1 +0.2
in planta epiphytic; Green bean -1.1 +0.0 -0.2 +0.0 -0.1
in planta apoplastic, sonication recovery; Green bean -1.0 -0.2 +0.1 -0.2 -0.0
aphid library passed through aphids in food, 72 hours -0.9 -0.2 -0.1 -0.1 -0.1
in planta apoplastic, sonication recovery; Green bean -0.8 -0.2 -0.1 -0.2 -0.0
stress KB with Biochanin a diacetate 10 mM -0.9 +0.2 -0.1 +0.0 +0.0
in planta apoplastic; Lima bean -0.7 -0.2 +0.1 +0.1 -0.0
carbon source Glycerol (C) +0.6 -0.2 -0.0 -0.2 +0.0
stress KB with Carbenicillin 250 ug/ml -0.6 +0.3 +0.3 +0.1 +0.0
carbon source D-Mannose (C) +0.6 -0.2 -0.1 -0.3 +0.2
carbon source Sucrose (C) +0.6 -0.0 -0.2 -0.2 +0.2
stress KB with Dimethyl Sulfoxide 1 vol% -0.2 +0.3 +0.4 +0.2 +0.1
stress KB with Cotarnine Chloride 10 mM +0.7 -0.2 +0.2 +0.0 +0.1
stress KB with Chrysin 10 mM +0.9 +0.1 +0.2 -0.1 +0.0
stress KB with Gambogic Acid 10 mM +0.8 -0.0 +0.1 +0.1 +0.1
stress KB with Oxonitine 10 mM +0.9 -0.0 +0.2 +0.1 -0.1
stress KB with Erythromycin 25 ug/ml +0.3 +0.2 +0.3 +0.2 +0.0
stress KB with Khayasin C 10 mM +0.9 +0.0 +0.3 +0.1 -0.0
stress KB with Fusaric 250 ug/ml +0.4 +0.1 +0.4 +0.1 +0.1
in planta epiphytic; Green bean +0.4 +0.2 +0.3 +0.1 +0.2
in planta apoplastic; Pepper +0.8 +0.2 +0.0 +0.0 +0.2
in planta apoplastic, grinding recovery; Green bean +1.1 -0.0 +0.1 +0.1 +0.1
stress KB with Nalidixic 12.5 ug/ml +0.5 +0.3 +0.2 +0.1 +0.1
in planta epiphytic; Lima bean +1.2 +0.2 +0.1 -0.2 +0.1
in planta apoplastic, chopping recovery; Green bean +0.4 +0.3 +0.3 +0.1 +0.3
kb KB +0.7 +0.2 +0.3 +0.3 +0.1
stress KB with Benzalkonium Chloride 6.25 ug/ml +1.2 -0.4 +0.6 +0.3 -0.0
stress KB with Acridine orange 62.5 ug/ml +1.5 -0.3 +0.5 +0.1 -0.1
stress KB with Mitomycin C 0.625 ug/ml +2.0 -0.2 +0.5 +0.4 +0.0
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