Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0408 and Psyr_0409 are separated by 114 nucleotidesPsyr_0409 and Psyr_0410 are separated by 10 nucleotidesPsyr_0410 and Psyr_0411 are separated by 358 nucleotidesPsyr_0411 and Psyr_0412 are separated by 118 nucleotides Psyr_0408: Psyr_0408 - shikimate kinase, at 438,565 to 439,083 _0408 Psyr_0409: Psyr_0409 - 3-dehydroquinate synthase, at 439,198 to 440,301 _0409 Psyr_0410: Psyr_0410 - conserved hypothetical protein, at 440,312 to 441,934 _0410 Psyr_0411: Psyr_0411 - glutamate synthase (NADPH) large subunit, at 442,293 to 446,738 _0411 Psyr_0412: Psyr_0412 - glutamate synthase (NADPH) small subunit, at 446,857 to 448,275 _0412
Group Condition Psyr_0408 Psyr_0409 Psyr_0410 Psyr_0411 Psyr_0412
carbon source L-Malic (C) N.D. N.D. -1.1 -4.1 -3.8
carbon source Citric Acid (C) N.D. N.D. -0.1 -4.2 -3.9
in planta epiphytic; Lima bean N.D. N.D. -0.2 -4.1 -3.9
in planta epiphytic; Lima bean N.D. N.D. -0.1 -4.3 -3.6
carbon source Fumaric (C) N.D. N.D. -0.1 -3.8 -3.9
carbon source a-Ketoglutaric (C) N.D. N.D. +0.0 -4.0 -3.6
carbon source D-Mannose (C) N.D. N.D. -0.2 -3.5 -3.6
carbon source Citric Acid (C) N.D. N.D. -0.0 -3.6 -3.6
carbon source Glycerol (C) N.D. N.D. +0.4 -3.6 -4.0
carbon source Sucrose (C) N.D. N.D. -0.0 -3.5 -3.5
in planta epiphytic; Lima bean N.D. N.D. +0.1 -3.4 -3.6
carbon source 4-hydroxybutyric (C) N.D. N.D. +0.1 -3.5 -3.5
carbon source Succinic Acid (C) N.D. N.D. +0.6 -3.6 -3.3
in planta epiphytic; Lima bean N.D. N.D. +0.1 -3.3 -2.7
carbon source D-Gluconic (C) N.D. N.D. +1.6 -3.6 -3.4
in planta Green bean; epiphytic N.D. N.D. -0.5 -2.7 -1.8
in planta Green bean; epiphytic N.D. N.D. -0.4 -2.7 -1.9
in planta epiphytic; Green bean N.D. N.D. +0.0 -1.7 -0.9
in planta epiphytic; Green bean N.D. N.D. +0.1 -1.7 -0.7
in planta epiphytic; Green bean N.D. N.D. +0.2 -1.6 -0.7
in planta epiphytic; Green bean N.D. N.D. +0.2 -1.5 -0.6
in planta apoplastic, sonication recovery; Green bean N.D. N.D. -0.5 -0.4 -0.8
in planta apoplastic, sonication recovery; Green bean N.D. N.D. -0.5 -0.4 -0.6
in planta apoplastic, chopping recovery; Green bean N.D. N.D. -0.3 -0.6 -0.7
aphid library passed through aphids in food, 72 hours N.D. N.D. -0.7 -0.4 -0.4
aphid library passed through aphids in food, 72 hours N.D. N.D. -1.0 -0.7 +0.1
in planta apoplastic; Pepper N.D. N.D. -0.0 -0.6 -0.8
in planta apoplastic, grinding recovery; Green bean N.D. N.D. -0.2 -0.3 -0.8
in planta apoplastic; Pepper N.D. N.D. +0.0 -0.6 -0.6
stress KB with Novobiocin 250 ug/ml N.D. N.D. -0.5 -0.6 -0.1
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