Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0403 and Psyr_0404 overlap by 1 nucleotidesPsyr_0404 and Psyr_0405 overlap by 4 nucleotidesPsyr_0405 and Psyr_0406 overlap by 4 nucleotidesPsyr_0406 and Psyr_0407 overlap by 4 nucleotides Psyr_0403: Psyr_0403 - Type IV pilus assembly protein PilM, at 433,624 to 434,688 _0403 Psyr_0404: Psyr_0404 - Fimbrial assembly, at 434,688 to 435,263 _0404 Psyr_0405: Psyr_0405 - Pilus assembly protein, PilO, at 435,260 to 435,883 _0405 Psyr_0406: Psyr_0406 - Pilus assembly protein, PilQ, at 435,880 to 436,407 _0406 Psyr_0407: Psyr_0407 - type II and III secretion system protein:NolW-like protein:NolW-like protein, at 436,404 to 438,560 _0407
Group Condition Psyr_0403 Psyr_0404 Psyr_0405 Psyr_0406 Psyr_0407
in planta apoplastic; Green bean; 6 days -0.3 -0.3 -0.9 -0.6 -0.5
aphid library passed through aphids in food, 24 hours -0.4 -0.4 -0.6 -0.6 +0.1
aphid library passed through aphids in food, 24 hours -0.3 -0.4 -0.3 -0.6 -0.3
in planta apoplastic; Green bean; 6 days -0.5 -0.4 -0.5 -0.2 -0.2
aphid library passed through aphids in food, 72 hours -0.2 -1.2 +0.4 -0.4 -0.4
stress KB with Oxonitine 10 mM -0.1 -0.3 -0.3 -0.7 -0.2
in planta apoplastic, sonication recovery; Green bean -0.0 -0.2 -0.9 -0.3 -0.3
stress KB with Karanjin 10 mM +0.0 -0.1 -0.5 -0.6 -0.4
aphid library passed through aphids in food, 24 hours -0.5 -0.3 -0.3 -0.2 -0.3
stress KB with Acacetin 10 mM +0.1 -0.6 -0.0 -0.9 -0.0
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.1 -0.4 -0.2 -0.6 -0.3
stress MBOA 0.5 mM -0.2 -0.4 -0.5 +0.3 -0.3
in planta apoplastic, chopping recovery; Green bean -0.9 +0.3 +0.6 -0.2 -0.8
stress KB with Dimethyl Sulfoxide 1 vol% +0.2 -0.2 -0.6 -0.5 +0.1
in planta apoplastic, grinding recovery; Green bean -0.2 +0.1 -0.1 -0.8 +0.5
stress KB with Plumbagin 10 mM -0.0 -0.3 -0.7 +0.5 +0.1
stress KB with Physcion 10 mM +0.0 -0.7 +0.3 +0.4 -0.5
stress KB with 4-hydroxychalcone 10 mM +0.0 -0.7 +0.4 +0.3 -0.5
in planta apoplastic; Green bean; 13 days +0.0 +0.5 -0.8 +0.4 -0.3
kb KB +0.2 -0.4 -0.0 +0.8 -0.3
stress KB with Diallyl sulfide 10 mM +0.1 +0.3 +0.2 +0.3 -0.7
in planta apoplastic; Lima bean +0.1 -0.3 +0.7 -0.3 +0.3
carbon source D-Gluconic (C) +0.4 -0.1 -0.5 +0.9 +0.0
carbon source Sucrose (C) +0.1 -0.2 -0.2 +0.9 +0.2
stress KB with Chloramphenicol 12.5 ug/ml +0.2 +0.3 -0.3 +0.5 +0.4
in planta epiphytic; Green bean +0.2 -0.1 +0.5 +0.6 +0.2
in planta Green bean; epiphytic +0.6 +0.4 -0.1 +0.6 +0.2
carbon source Glycerol (C) +0.3 +0.0 +0.1 +1.1 +0.2
carbon source L-Proline (C) +0.5 +0.0 +0.8 +1.0 +0.1
in planta epiphytic; Green bean +0.2 +0.5 +0.5 +0.7 +0.6
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