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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0364 and Psyr_0365 are separated by 49 nucleotides
Psyr_0365 and Psyr_0366 overlap by 4 nucleotides
Psyr_0366 and Psyr_0367 are separated by 93 nucleotides
Psyr_0367 and Psyr_0368 are separated by 180 nucleotides
Psyr_0364: Psyr_0364 - sodium/proton antiporter, NhaA family, at 388,591 to 389,766
_0364
Psyr_0365: Psyr_0365 - protein of unknown function DUF886, at 389,816 to 390,412
_0365
Psyr_0366: Psyr_0366 - transcriptional regulator, GntR family, at 390,409 to 391,230
_0366
Psyr_0367: Psyr_0367 - formimidoylglutamate deiminase, at 391,324 to 392,688
_0367
Psyr_0368: Psyr_0368 - lipoprotein Blc, at 392,869 to 393,447
_0368
Group
Condition
Psyr
_0364
Psyr
_0365
Psyr
_0366
Psyr
_0367
Psyr
_0368
carbon source
Citric Acid (C)
-1.3
-0.0
-0.7
-0.2
+0.2
stress
MBOA 0.5 mM
-0.8
-0.5
-0.7
+0.3
-0.0
aphid
library passed through aphids in food, 72 hours
-1.3
-0.1
-0.2
-0.1
-0.1
aphid
library passed through aphids in food, 72 hours
-1.2
-0.2
-0.3
-0.1
+0.2
no stress control
no stress control
-0.8
+0.0
-0.6
+0.3
-0.5
nophagecontrol
TIme6-nophage
-1.3
-0.2
-0.0
+0.0
+0.1
stress
DMSO
-0.9
-0.5
-0.1
+0.2
-0.0
no stress control
no stress control
-1.3
-0.1
-0.3
+0.3
+0.0
in planta
apoplastic; Lima bean
-0.4
-0.9
-0.2
+0.0
+0.2
carbon source
4-hydroxybutyric (C)
-0.7
-0.4
-0.3
+0.0
+0.2
stress
MBOA 1.2 mM
-0.7
-0.2
-0.6
+0.2
+0.1
nophagecontrol
TIme6-nophage
-1.0
-0.1
-0.3
+0.2
+0.1
stress
MBOA 1.2 mM
-1.1
-0.1
-0.3
+0.4
+0.1
stress
MBOA 1.2 mM
-0.8
-0.2
-0.3
+0.3
+0.0
stress
MBOA 1.2 mM
-0.9
-0.3
-0.1
+0.3
-0.1
stress
MBOA 2.5 mM
-1.1
+0.2
-0.1
+0.3
-0.2
no stress control
no stress control
-1.0
+0.1
+0.0
+0.2
-0.2
in planta
epiphytic; Green bean
-0.4
-0.4
-0.3
-0.2
+0.4
stress
DMSO
-0.7
-0.1
-0.3
+0.3
-0.1
in planta
epiphytic; Green bean
+0.4
-0.9
-0.1
-0.2
-0.0
no stress control
no stress control
-0.6
+0.2
-0.1
+0.3
-0.5
in planta
Green bean; epiphytic
+0.3
-0.5
-0.5
+0.0
+0.0
stress
MBOA 2.5 mM
-0.2
+0.2
-0.4
+0.3
-0.4
in planta
apoplastic; Green bean; 13 days
-0.4
+0.6
-0.3
-0.2
-0.0
in planta
apoplastic, grinding recovery; Green bean
+0.7
-1.1
+0.4
-0.3
+0.3
aphid
library passed through aphids in food, 72 hours
-0.6
+0.4
+1.1
-0.7
-0.0
in planta
apoplastic, sonication recovery; Green bean
+0.6
-0.9
+0.2
+0.0
+0.1
in planta
apoplastic; Pepper
+0.4
+0.7
+0.0
-0.1
-0.4
in planta
apoplastic, sonication recovery; Green bean
+0.8
-0.4
+0.5
-0.0
+0.5
in planta
epiphytic; Lima bean
+0.6
+0.6
-0.0
-0.0
+0.4
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