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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0306 and Psyr_0307 are separated by 586 nucleotides
Psyr_0307 and Psyr_0308 are separated by 288 nucleotides
Psyr_0308 and Psyr_0309 are separated by 47 nucleotides
Psyr_0309 and Psyr_0310 overlap by 11 nucleotides
Psyr_0306: Psyr_0306 - TonB, C-terminal, at 326,643 to 327,308
_0306
Psyr_0307: Psyr_0307 - hypothetical protein, at 327,895 to 328,398
_0307
Psyr_0308: Psyr_0308 - hypothetical protein, at 328,687 to 329,424
_0308
Psyr_0309: Psyr_0309 - Colicin immunity protein/pyocin immunity protein, at 329,472 to 329,744
_0309
Psyr_0310: Psyr_0310 - HNH endonuclease:S-type Pyocin, at 329,734 to 331,704
_0310
Group
Condition
Psyr
_0306
Psyr
_0307
Psyr
_0308
Psyr
_0309
Psyr
_0310
stress
KB with Nalidixic 12.5 ug/ml
-0.4
-0.4
-0.3
N.D.
-0.0
stress
KB with Fusaric 250 ug/ml
-0.2
-0.6
-0.3
N.D.
-0.1
in planta
apoplastic; Pepper
-0.4
-0.4
-0.0
N.D.
-0.2
stress
KB with Trimethoprim 125 ug/ml
-0.1
-0.4
-0.3
N.D.
-0.1
stress
KB with Nitrofurantoin 125 ug/ml
-0.3
-0.2
-0.2
N.D.
-0.1
stress
KB with Aristolochic Acid 10 mM
-0.3
-0.2
-0.1
N.D.
-0.1
stress
KB with Emodin 10 mM
-0.4
-0.2
-0.1
N.D.
-0.0
stress
KB with L-alliin 10 mM
+0.1
-0.3
-0.4
N.D.
-0.0
stress
KB with Erythromycin 25 ug/ml
+0.1
-0.3
-0.3
N.D.
-0.1
stress
KB with Matrine 10 mM
+0.1
-0.5
-0.2
N.D.
-0.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.3
-0.3
-0.1
N.D.
-0.4
stress
KB with Novobiocin 250 ug/ml
-0.4
-0.2
+0.1
N.D.
-0.0
in planta
epiphytic; Lima bean
-0.3
-0.3
+0.2
N.D.
-0.1
stress
KB with 2',5'-Dihydroxy-4-Methoxychalcone 10 mM
+0.2
-0.4
+0.1
N.D.
-0.2
stress
KB with Sclareolide 10 mM
-0.3
+0.2
-0.3
N.D.
-0.0
stress
MBOA 0.5 mM
+0.2
-0.5
+0.1
N.D.
-0.1
in planta
apoplastic, sonication recovery; Green bean
+0.2
-0.4
-0.3
N.D.
+0.2
stress
KB with Phloretin 250 ug/ml
+0.3
-0.3
-0.1
N.D.
-0.1
in planta
epiphytic; Green bean
+0.3
-0.1
-0.3
N.D.
-0.1
stress
KB with Conessine 10 mM
-0.3
+0.3
+0.0
N.D.
-0.2
in planta
apoplastic, sonication recovery; Green bean
+0.2
-0.1
-0.3
N.D.
+0.2
in planta
apoplastic; Green bean; 13 days
+0.0
+0.4
-0.4
N.D.
-0.1
stress
KB with Ferulic Acid 180 ug/ml
-0.3
+0.3
+0.1
N.D.
+0.1
stress
KB with Benzalkonium Chloride 6.25 ug/ml
+0.6
-0.1
-0.2
N.D.
-0.1
aphid
library passed through aphids in food, 72 hours
-0.2
+0.4
+0.1
N.D.
-0.1
in planta
apoplastic, grinding recovery; Green bean
-0.2
+0.3
+0.1
N.D.
+0.2
in planta
Green bean; epiphytic
-0.1
+0.3
+0.4
N.D.
-0.0
carbon source
D-Mannose (C)
+0.3
+0.4
+0.1
N.D.
-0.0
in planta
apoplastic; Green bean; 6 days
+0.5
+0.3
+0.0
N.D.
+0.0
in planta
apoplastic; Green bean; 6 days
+0.5
+0.4
+0.2
N.D.
+0.0
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