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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0124 and Psyr_0125 are separated by 270 nucleotides
Psyr_0125 and Psyr_0126 are separated by 16 nucleotides
Psyr_0126 and Psyr_0127 are separated by 83 nucleotides
Psyr_0127 and Psyr_0128 are separated by 229 nucleotides
Psyr_0124: Psyr_0124 - Hemolysin-type calcium-binding region, at 133,779 to 135,326
_0124
Psyr_0125: Psyr_0125 - conserved hypothetical protein, at 135,597 to 135,953
_0125
Psyr_0126: Psyr_0126 - Protein of unknown function DUF805, at 135,970 to 136,410
_0126
Psyr_0127: Psyr_0127 - Glutathione-dependent formaldehyde-activating, GFA, at 136,494 to 136,931
_0127
Psyr_0128: Psyr_0128 - H-NS family protein MvaT, at 137,161 to 137,526
_0128
Group
Condition
Psyr
_0124
Psyr
_0125
Psyr
_0126
Psyr
_0127
Psyr
_0128
in planta
epiphytic; Lima bean
+0.0
-0.5
-0.1
-0.0
-0.6
aphid
library passed through aphids in food, 72 hours
-0.0
-0.7
-0.5
-0.2
+0.3
in planta
epiphytic; Green bean
-0.2
-0.3
-0.2
-0.0
-0.3
in planta
apoplastic; Lima bean
-0.0
+0.1
-0.1
+0.1
-0.8
in planta
epiphytic; Lima bean
+0.0
-0.3
-0.3
+0.1
-0.1
aphid
library passed through aphids in food, 72 hours
+0.2
-0.6
+0.1
-0.4
+0.4
stress
KB with Lupeol 10 mM
-0.1
+0.0
-0.5
+0.0
+0.2
in planta
apoplastic; Pepper
-0.1
-0.5
+0.0
+0.2
+0.0
in planta
apoplastic; Pepper
-0.2
+0.3
-0.3
+0.0
-0.1
carbon source
a-Ketoglutaric (C)
-0.1
-0.2
+0.3
+0.1
-0.3
stress
KB with Prenyletin 10 mM
-0.1
+0.1
-0.4
-0.1
+0.3
stress
KB with Fusaric 250 ug/ml
+0.1
-0.2
+0.2
+0.2
-0.4
carbon source
D-Mannose (C)
+0.1
-0.4
+0.0
-0.1
+0.3
in planta
apoplastic; Pepper
-0.0
-1.0
+0.1
+0.3
+0.6
stress
KB with Paeonol 10 mM
-0.0
+0.1
-0.3
-0.0
+0.4
carbon source
Citric Acid (C)
+0.1
-0.2
-0.1
+0.0
+0.4
carbon source
4-hydroxybutyric (C)
+0.0
+0.2
-0.1
-0.1
+0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.0
-0.0
-0.3
-0.1
+0.6
stress
KB with Acacetin 10 mM
+0.0
-0.3
+0.2
+0.1
+0.2
carbon source
L-Proline (C)
+0.1
-0.4
+0.3
+0.1
+0.2
stress
KB with Acridine orange 62.5 ug/ml
+0.0
+0.5
-0.2
-0.1
+0.2
carbon source
4-Aminobutyric (C)
+0.1
-0.2
+0.2
+0.1
+0.4
stress
KB with Nalidixic 12.5 ug/ml
+0.1
+0.1
+0.3
+0.3
-0.2
carbon source
Glycerol (C)
-0.0
-0.2
+0.2
+0.0
+0.6
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
+0.4
+0.3
+0.1
-0.0
carbon source
D-Gluconic (C)
+0.1
-0.1
+0.4
+0.0
+0.5
in planta
apoplastic, grinding recovery; Green bean
-0.1
+0.6
+0.3
+0.1
+0.2
stress
KB with Novobiocin 250 ug/ml
+0.1
+0.4
+0.5
+0.7
-0.0
in planta
apoplastic, sonication recovery; Green bean
+0.0
+0.6
+0.5
+0.2
+0.4
in planta
apoplastic, sonication recovery; Green bean
+0.0
+0.8
+0.6
+0.1
+0.5
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