Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0091 and Psyr_0092 are separated by 286 nucleotidesPsyr_0092 and Psyr_0093 are separated by 45 nucleotidesPsyr_0093 and Psyr_RNA1 are separated by 12 nucleotidesPsyr_RNA1 and Psyr_0094 are separated by 45 nucleotides Psyr_0091: Psyr_0091 - succinate semialdehyde dehydrogenase, at 99,948 to 101,390 _0091 Psyr_0092: Psyr_0092 - Lysine exporter protein (LYSE/YGGA), at 101,677 to 102,312 _0092 Psyr_0093: Psyr_0093 - Flavoprotein monooxygenase, at 102,358 to 103,761 _0093 Psyr_RNA1: Psyr_RNA1 - tRNA-Arg, at 103,774 to 103,850 _RNA1 Psyr_0094: Psyr_0094 - hypothetical protein, at 103,896 to 104,600 _0094
Group Condition Psyr_0091 Psyr_0092 Psyr_0093 Psyr_RNA1 Psyr_0094
in planta epiphytic; Lima bean -0.3 -0.7 +0.1 N.D. -0.3
in planta apoplastic; Pepper -0.2 -0.5 -0.0 N.D. -0.3
carbon source 4-Aminobutyric (C) -1.6 +0.5 +0.2 N.D. +0.1
in planta apoplastic; Lima bean -0.2 -0.6 -0.2 N.D. +0.1
in planta apoplastic; Lima bean -0.2 -0.3 -0.1 N.D. -0.1
stress KB with Irigenin 10 mM -0.2 -0.6 +0.1 N.D. -0.0
stress KB with Chrysin 10 mM -0.3 -0.5 -0.0 N.D. +0.2
in planta apoplastic; Lima bean -0.2 -0.3 -0.1 N.D. +0.2
in planta apoplastic; Lima bean -0.2 -0.1 -0.2 N.D. +0.1
stress KB with Methanol 5 vol% -0.0 -0.4 +0.0 N.D. +0.2
stress KB with Prenyletin 10 mM +0.1 -0.3 +0.2 N.D. -0.1
stress KB with Ferulic Acid 180 ug/ml +0.2 -0.4 -0.2 N.D. +0.3
stress KB with Plumbagin 10 mM -0.3 -0.1 +0.2 N.D. +0.2
stress KB with Fusaric 250 ug/ml +0.4 -0.3 +0.1 N.D. -0.1
in planta apoplastic; Green bean; 13 days +0.6 -0.4 -0.3 N.D. +0.1
stress KB with Chaulmoogric 10 mM -0.1 +0.3 +0.1 N.D. -0.3
carbon source 4-hydroxybutyric (C) -0.1 +0.2 +0.2 N.D. -0.3
in planta apoplastic, grinding recovery; Green bean +0.1 +0.2 -0.3 N.D. +0.0
stress KB with Sinomenine 10 mM -0.1 -0.2 +0.2 N.D. +0.3
aphid library passed through aphids in food, 72 hours +0.4 -0.3 +0.3 N.D. -0.2
carbon source Sucrose (C) +0.1 +0.5 -0.1 N.D. -0.4
carbon source L-Proline (C) -0.1 +0.4 +0.2 N.D. -0.0
kb KB +0.0 +0.5 +0.0 N.D. -0.1
carbon source D-Gluconic (C) +0.1 +0.4 +0.2 N.D. -0.2
stress KB with Chloramphenicol 12.5 ug/ml +0.1 +0.4 +0.2 N.D. -0.1
in planta apoplastic, chopping recovery; Green bean -0.1 +0.3 +0.0 N.D. +0.3
stress KB with Mitomycin C 0.625 ug/ml +0.3 -0.2 +0.1 N.D. +0.4
in planta apoplastic, grinding recovery; Green bean +0.2 +0.7 -0.2 N.D. +0.0
stress MBOA 1.2 mM +0.1 +0.4 +0.1 N.D. +0.2
carbon source Succinic Acid (C) +0.1 +0.4 +0.1 N.D. +0.1
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