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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0043 and Psyr_0044 are separated by 171 nucleotides
Psyr_0044 and Psyr_0045 are separated by 112 nucleotides
Psyr_0045 and Psyr_0046 overlap by 4 nucleotides
Psyr_0046 and Psyr_0047 are separated by 44 nucleotides
Psyr_0043: Psyr_0043 - conserved hypothetical protein, at 44,004 to 45,059
_0043
Psyr_0044: Psyr_0044 - transferase hexapeptide repeat protein, at 45,231 to 45,776
_0044
Psyr_0045: Psyr_0045 - oligopeptidase A, Metallo peptidase, MEROPS family M03A, at 45,889 to 47,940
_0045
Psyr_0046: Psyr_0046 - conserved hypothetical protein, at 47,937 to 48,227
_0046
Psyr_0047: Psyr_0047 - hypothetical protein, at 48,272 to 48,574
_0047
Group
Condition
Psyr
_0043
Psyr
_0044
Psyr
_0045
Psyr
_0046
Psyr
_0047
aphid
library passed through aphids in food, 72 hours
-0.0
-5.1
+0.1
-0.4
+0.2
stress
KB with Anisodamine Hydrobromide () 10 mM
+0.1
-2.8
-0.1
-0.2
-0.3
carbon source
Citric Acid (C)
-0.3
-3.0
-0.2
+0.5
-0.1
stress
MBOA 0.5 mM
-0.1
-2.0
-0.2
-0.1
-0.0
in planta
apoplastic; Pepper
-0.2
-0.9
-0.1
-1.0
-0.0
stress
KB with Naringin 250 ug/ml
-0.1
-1.8
-0.1
-0.2
+0.1
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.0
-1.9
-0.1
-0.3
+0.1
stress
KB with Nitrofurantoin 125 ug/ml
-0.1
-1.3
-0.4
-0.2
-0.1
in planta
epiphytic; Green bean
-0.5
+0.0
-0.4
-1.1
-0.1
in planta
epiphytic; Lima bean
-0.2
-0.6
-0.2
-1.1
+0.3
stress
MBOA 1.2 mM
-0.0
-1.3
-0.0
-0.0
-0.4
stress
KB with Chloramphenicol 12.5 ug/ml
-0.2
-1.5
-0.2
-0.0
+0.0
stress
KB with Erythromycin 25 ug/ml
-0.5
-1.0
-0.2
-0.2
+0.1
stress
KB with Paclitaxel 10 mM
-0.0
-2.0
+0.0
+0.4
-0.0
stress
KB with Gambogic Acid 10 mM
-0.0
-1.4
+0.2
-0.3
-0.2
stress
KB with Nonanoic 10 mM
+0.2
-1.0
-0.1
-0.6
-0.2
carbon source
L-Malic (C)
-1.0
-0.9
-0.1
+0.5
+0.0
stress
KB with Mexicanolide 10 mM
-0.1
-1.4
-0.1
+0.2
-0.1
stress
KB with Palmatine chloride 10 mM
+0.2
-1.4
+0.0
-0.1
-0.3
stress
KB with Harmol 10 mM
+0.2
-1.2
-0.1
-0.3
-0.1
stress
KB with Isoliquiritigenin 10 mM
+0.2
-1.7
-0.2
+0.3
+0.0
aphid
library passed through aphids in food, 72 hours
+0.0
-1.0
-0.1
-0.4
+0.3
carbon source
4-Aminobutyric (C)
-0.0
+0.8
-0.3
-0.7
+0.3
in planta
apoplastic, sonication recovery; Green bean
+0.2
-1.5
+0.4
+1.0
+0.1
in planta
apoplastic; Lima bean
+0.1
+0.5
+0.1
+0.8
-0.4
in planta
apoplastic; Green bean; 13 days
+0.2
-0.3
+0.1
+1.1
-0.1
in planta
apoplastic; Pepper
-0.2
+0.9
-0.1
+0.2
+0.5
stress
KB with Acridine orange 62.5 ug/ml
+0.2
+1.3
+0.1
+0.3
+0.0
in planta
epiphytic; Lima bean
+0.1
+2.9
-0.1
+0.9
-0.1
in planta
epiphytic; Lima bean
+0.1
+3.4
-0.0
+0.6
-0.0
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