Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0030 and Psyr_0031 are separated by 144 nucleotidesPsyr_0031 and Psyr_0032 are separated by 266 nucleotidesPsyr_0032 and Psyr_0033 are separated by 125 nucleotidesPsyr_0033 and Psyr_0034 overlap by 4 nucleotides Psyr_0030: Psyr_0030 - transcriptional regulator, LysR family, at 34,350 to 35,300 _0030 Psyr_0031: Psyr_0031 - Alpha/beta hydrolase fold protein, at 35,445 to 36,269 _0031 Psyr_0032: Psyr_0032 - conserved hypothetical protein, at 36,536 to 37,066 _0032 Psyr_0033: Psyr_0033 - tryptophan synthase, alpha chain, at 37,192 to 38,001 _0033 Psyr_0034: Psyr_0034 - tryptophan synthase, beta chain, at 37,998 to 39,227 _0034
Group Condition Psyr_0030 Psyr_0031 Psyr_0032 Psyr_0033 Psyr_0034
in planta apoplastic; Lima bean +0.2 -0.3 -0.1 -4.1 -4.8
in planta epiphytic; Green bean -0.0 -0.1 -0.1 -4.7 -3.9
in planta apoplastic; Lima bean +0.2 -0.1 -0.2 -4.3 -4.0
stress KB with Avocatin B 10 mM -0.1 +0.0 -0.6 -3.7 -3.9
in planta epiphytic; Green bean -0.0 -0.3 -0.1 -3.7 -4.1
in planta apoplastic; Lima bean +0.1 -0.3 -0.1 -3.2 -4.6
in planta apoplastic; Pepper -0.3 +0.1 +0.6 -4.2 -4.2
in planta apoplastic, sonication recovery; Green bean +0.3 -0.3 +0.2 -4.1 -3.9
in planta apoplastic; Lima bean +0.2 -0.0 +0.0 -4.0 -4.0
in planta apoplastic, sonication recovery; Green bean -0.0 -0.2 +0.1 -3.8 -3.9
carbon source Succinic Acid (C) -0.2 -0.1 -0.0 -4.1 -3.3
in planta Green bean; epiphytic -0.5 -0.4 -0.0 -3.6 -3.2
in planta apoplastic, grinding recovery; Green bean -0.0 +0.3 -0.4 -3.6 -3.9
stress KB with Sclareolide 10 mM -0.2 +0.1 -0.3 -3.5 -3.6
in planta epiphytic; Lima bean -0.1 -0.0 +0.2 -3.3 -4.1
in planta epiphytic; Lima bean -0.1 -0.1 -0.5 -3.5 -3.1
in planta apoplastic; Pepper -0.1 +0.1 +0.6 -3.9 -4.0
carbon source D-Gluconic (C) -0.3 -0.1 +0.0 -3.7 -3.2
in planta apoplastic; Pepper -0.0 -0.1 +0.4 -3.9 -3.6
stress KB with Conessine 10 mM -0.2 +0.1 -0.4 -3.4 -3.3
carbon source Fumaric (C) -0.2 -0.0 +0.2 -3.9 -3.1
carbon source D-Mannose (C) -0.2 -0.1 +0.1 -3.6 -3.3
carbon source Sucrose (C) -0.2 +0.1 +0.2 -3.7 -3.6
in planta apoplastic; Pepper +0.1 +0.2 +0.0 -4.0 -3.5
in planta apoplastic; Pepper +0.3 -0.0 +0.5 -4.2 -3.6
in planta epiphytic; Green bean -0.3 +0.2 -0.1 -3.5 -3.0
carbon source a-Ketoglutaric (C) -0.2 +0.3 +0.2 -3.7 -3.3
in planta epiphytic; Lima bean -0.1 +0.2 +0.2 -2.8 -4.2
carbon source L-Proline (C) -0.3 +0.2 +0.2 -3.5 -3.2
in planta apoplastic; Pepper +0.2 +0.2 +0.1 -3.3 -3.6
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