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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0030 and Psyr_0031 are separated by 144 nucleotides
Psyr_0031 and Psyr_0032 are separated by 266 nucleotides
Psyr_0032 and Psyr_0033 are separated by 125 nucleotides
Psyr_0033 and Psyr_0034 overlap by 4 nucleotides
Psyr_0030: Psyr_0030 - transcriptional regulator, LysR family, at 34,350 to 35,300
_0030
Psyr_0031: Psyr_0031 - Alpha/beta hydrolase fold protein, at 35,445 to 36,269
_0031
Psyr_0032: Psyr_0032 - conserved hypothetical protein, at 36,536 to 37,066
_0032
Psyr_0033: Psyr_0033 - tryptophan synthase, alpha chain, at 37,192 to 38,001
_0033
Psyr_0034: Psyr_0034 - tryptophan synthase, beta chain, at 37,998 to 39,227
_0034
Group
Condition
Psyr
_0030
Psyr
_0031
Psyr
_0032
Psyr
_0033
Psyr
_0034
in planta
apoplastic; Lima bean
+0.2
-0.3
-0.1
-4.1
-4.8
in planta
epiphytic; Green bean
-0.0
-0.1
-0.1
-4.7
-3.9
in planta
apoplastic; Lima bean
+0.2
-0.1
-0.2
-4.3
-4.0
stress
KB with Avocatin B 10 mM
-0.1
+0.0
-0.6
-3.7
-3.9
in planta
epiphytic; Green bean
-0.0
-0.3
-0.1
-3.7
-4.1
in planta
apoplastic; Lima bean
+0.1
-0.3
-0.1
-3.2
-4.6
in planta
apoplastic; Pepper
-0.3
+0.1
+0.6
-4.2
-4.2
in planta
apoplastic, sonication recovery; Green bean
+0.3
-0.3
+0.2
-4.1
-3.9
in planta
apoplastic; Lima bean
+0.2
-0.0
+0.0
-4.0
-4.0
in planta
apoplastic, sonication recovery; Green bean
-0.0
-0.2
+0.1
-3.8
-3.9
carbon source
Succinic Acid (C)
-0.2
-0.1
-0.0
-4.1
-3.3
in planta
Green bean; epiphytic
-0.5
-0.4
-0.0
-3.6
-3.2
in planta
apoplastic, grinding recovery; Green bean
-0.0
+0.3
-0.4
-3.6
-3.9
stress
KB with Sclareolide 10 mM
-0.2
+0.1
-0.3
-3.5
-3.6
in planta
epiphytic; Lima bean
-0.1
-0.0
+0.2
-3.3
-4.1
in planta
epiphytic; Lima bean
-0.1
-0.1
-0.5
-3.5
-3.1
in planta
apoplastic; Pepper
-0.1
+0.1
+0.6
-3.9
-4.0
carbon source
D-Gluconic (C)
-0.3
-0.1
+0.0
-3.7
-3.2
in planta
apoplastic; Pepper
-0.0
-0.1
+0.4
-3.9
-3.6
stress
KB with Conessine 10 mM
-0.2
+0.1
-0.4
-3.4
-3.3
carbon source
Fumaric (C)
-0.2
-0.0
+0.2
-3.9
-3.1
carbon source
D-Mannose (C)
-0.2
-0.1
+0.1
-3.6
-3.3
carbon source
Sucrose (C)
-0.2
+0.1
+0.2
-3.7
-3.6
in planta
apoplastic; Pepper
+0.1
+0.2
+0.0
-4.0
-3.5
in planta
apoplastic; Pepper
+0.3
-0.0
+0.5
-4.2
-3.6
in planta
epiphytic; Green bean
-0.3
+0.2
-0.1
-3.5
-3.0
carbon source
a-Ketoglutaric (C)
-0.2
+0.3
+0.2
-3.7
-3.3
in planta
epiphytic; Lima bean
-0.1
+0.2
+0.2
-2.8
-4.2
carbon source
L-Proline (C)
-0.3
+0.2
+0.2
-3.5
-3.2
in planta
apoplastic; Pepper
+0.2
+0.2
+0.1
-3.3
-3.6
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