Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 193 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psyr_0013 and Psyr_0014 are separated by 38 nucleotides
Psyr_0014 and Psyr_0015 are separated by 339 nucleotides
Psyr_0015 and Psyr_0016 are separated by 153 nucleotides
Psyr_0016 and Psyr_0017 overlap by 4 nucleotides
Psyr_0013: Psyr_0013 - DNA-3-methyladenine glycosylase I, at 14,995 to 15,546
_0013
Psyr_0014: Psyr_0014 - lipid A biosynthesis acyltransferase, at 15,585 to 16,472
_0014
Psyr_0015: Psyr_0015 - Oxidoreductase alpha (molybdopterin) subunit, at 16,812 to 19,175
_0015
Psyr_0016: Psyr_0016 - TrkA-N:TrkA-C, at 19,329 to 20,702
_0016
Psyr_0017: Psyr_0017 - 16S rRNA m(5)C-967 methyltransferase, at 20,699 to 22,045
_0017
Group
Condition
Psyr
_0013
Psyr
_0014
Psyr
_0015
Psyr
_0016
Psyr
_0017
carbon source
Citric Acid (C)
-0.7
-4.2
-0.1
-0.0
-0.1
stress
KB with Berberine 250 ug/ml
+0.0
-4.2
-0.1
-0.2
-0.5
aphid
library passed through aphids in food, 72 hours
-0.0
-4.7
+0.2
-0.1
-0.1
stress
KB with Acridine orange 62.5 ug/ml
-0.1
-3.9
-0.0
-0.1
-0.4
aphid
library passed through aphids in food, 72 hours
+0.5
-4.8
+0.0
+0.3
-0.6
stress
KB with Methanol 5 vol%
-0.1
-4.1
-0.1
-0.1
+0.0
stress
KB with Benzalkonium Chloride 6.25 ug/ml
-0.1
-3.4
-0.1
-0.1
-0.6
in planta
apoplastic, sonication recovery; Green bean
-0.0
-3.1
-0.3
-0.3
+0.1
stress
KB with Mitomycin C 0.625 ug/ml
+0.1
-3.4
-0.1
-0.4
+0.3
stress
KB with Carbenicillin 250 ug/ml
+0.0
-3.0
+0.0
-0.1
-0.5
carbon source
L-Malic (C)
-0.4
-3.1
-0.1
-0.0
+0.2
stress
KB with Cyclopamine 10 mM
-0.0
-3.0
+0.1
-0.2
-0.2
in planta
apoplastic; Green bean; 6 days
-0.2
-2.9
-0.1
-0.1
+0.1
in planta
apoplastic, sonication recovery; Green bean
-0.0
-2.4
-0.2
-0.3
-0.3
stress
KB with Dimethyl Sulfoxide 1 vol%
+0.0
-2.6
-0.0
+0.1
-0.5
stress
KB with Fusaric 250 ug/ml
+0.0
-2.6
+0.0
-0.3
-0.2
in planta
apoplastic; Green bean; 6 days
-0.2
-2.7
+0.0
-0.0
-0.0
stress
KB with Flavone 0.125 mg/ml
+0.1
-2.4
+0.1
-0.0
-0.7
in planta
apoplastic; Lima bean
-0.2
-2.5
+0.0
-0.3
+0.2
stress
KB with Flavone 0.25 mg/ml
-0.0
-2.2
+0.1
-0.3
-0.4
carbon source
4-hydroxybutyric (C)
+0.1
-2.0
+0.0
-0.3
-0.6
in planta
apoplastic, grinding recovery; Green bean
+0.5
-4.5
+0.1
+0.1
+1.1
stress
KB with Nalidixic 12.5 ug/ml
+0.2
-3.1
-0.0
+0.1
+0.1
stress
KB with Acriflavine 7.75 ug/ml
+0.3
-2.1
-0.1
-0.0
-0.8
in planta
apoplastic; Lima bean
+0.3
-2.0
-0.2
-0.0
-0.7
aphid
library passed through aphids in food, 72 hours
+0.6
-3.1
+0.0
+0.1
-0.2
in planta
apoplastic; Lima bean
+0.1
-2.2
+0.1
-0.2
+0.3
in planta
apoplastic; Pepper
+0.0
-2.2
-0.1
+0.2
+0.4
stress
KB with Novobiocin 250 ug/ml
-0.2
-2.1
+0.0
-0.1
+0.6
in planta
apoplastic, grinding recovery; Green bean
+0.1
-1.8
-0.0
-0.3
+0.8
remove
Psyr_0013
plot
remove
Psyr_0014
plot
remove
Psyr_0015
remove
Psyr_0016
plot
remove
Psyr_0017
plot