Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a

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500 ntPsyr_0013 and Psyr_0014 are separated by 38 nucleotidesPsyr_0014 and Psyr_0015 are separated by 339 nucleotidesPsyr_0015 and Psyr_0016 are separated by 153 nucleotidesPsyr_0016 and Psyr_0017 overlap by 4 nucleotides Psyr_0013: Psyr_0013 - DNA-3-methyladenine glycosylase I, at 14,995 to 15,546 _0013 Psyr_0014: Psyr_0014 - lipid A biosynthesis acyltransferase, at 15,585 to 16,472 _0014 Psyr_0015: Psyr_0015 - Oxidoreductase alpha (molybdopterin) subunit, at 16,812 to 19,175 _0015 Psyr_0016: Psyr_0016 - TrkA-N:TrkA-C, at 19,329 to 20,702 _0016 Psyr_0017: Psyr_0017 - 16S rRNA m(5)C-967 methyltransferase, at 20,699 to 22,045 _0017
Group Condition Psyr_0013 Psyr_0014 Psyr_0015 Psyr_0016 Psyr_0017
carbon source Citric Acid (C) -0.7 -4.2 -0.1 -0.0 -0.1
stress KB with Berberine 250 ug/ml +0.0 -4.2 -0.1 -0.2 -0.5
aphid library passed through aphids in food, 72 hours -0.0 -4.7 +0.2 -0.1 -0.1
stress KB with Acridine orange 62.5 ug/ml -0.1 -3.9 -0.0 -0.1 -0.4
aphid library passed through aphids in food, 72 hours +0.5 -4.8 +0.0 +0.3 -0.6
stress KB with Methanol 5 vol% -0.1 -4.1 -0.1 -0.1 +0.0
stress KB with Benzalkonium Chloride 6.25 ug/ml -0.1 -3.4 -0.1 -0.1 -0.6
in planta apoplastic, sonication recovery; Green bean -0.0 -3.1 -0.3 -0.3 +0.1
stress KB with Mitomycin C 0.625 ug/ml +0.1 -3.4 -0.1 -0.4 +0.3
stress KB with Carbenicillin 250 ug/ml +0.0 -3.0 +0.0 -0.1 -0.5
carbon source L-Malic (C) -0.4 -3.1 -0.1 -0.0 +0.2
stress KB with Cyclopamine 10 mM -0.0 -3.0 +0.1 -0.2 -0.2
in planta apoplastic; Green bean; 6 days -0.2 -2.9 -0.1 -0.1 +0.1
in planta apoplastic, sonication recovery; Green bean -0.0 -2.4 -0.2 -0.3 -0.3
stress KB with Dimethyl Sulfoxide 1 vol% +0.0 -2.6 -0.0 +0.1 -0.5
stress KB with Fusaric 250 ug/ml +0.0 -2.6 +0.0 -0.3 -0.2
in planta apoplastic; Green bean; 6 days -0.2 -2.7 +0.0 -0.0 -0.0
stress KB with Flavone 0.125 mg/ml +0.1 -2.4 +0.1 -0.0 -0.7
in planta apoplastic; Lima bean -0.2 -2.5 +0.0 -0.3 +0.2
stress KB with Flavone 0.25 mg/ml -0.0 -2.2 +0.1 -0.3 -0.4
carbon source 4-hydroxybutyric (C) +0.1 -2.0 +0.0 -0.3 -0.6
in planta apoplastic, grinding recovery; Green bean +0.5 -4.5 +0.1 +0.1 +1.1
stress KB with Nalidixic 12.5 ug/ml +0.2 -3.1 -0.0 +0.1 +0.1
stress KB with Acriflavine 7.75 ug/ml +0.3 -2.1 -0.1 -0.0 -0.8
in planta apoplastic; Lima bean +0.3 -2.0 -0.2 -0.0 -0.7
aphid library passed through aphids in food, 72 hours +0.6 -3.1 +0.0 +0.1 -0.2
in planta apoplastic; Lima bean +0.1 -2.2 +0.1 -0.2 +0.3
in planta apoplastic; Pepper +0.0 -2.2 -0.1 +0.2 +0.4
stress KB with Novobiocin 250 ug/ml -0.2 -2.1 +0.0 -0.1 +0.6
in planta apoplastic, grinding recovery; Green bean +0.1 -1.8 -0.0 -0.3 +0.8
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