Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_992 and Pf6N2E2_993 overlap by 4 nucleotidesPf6N2E2_993 and Pf6N2E2_994 are separated by 309 nucleotidesPf6N2E2_994 and Pf6N2E2_995 are separated by 100 nucleotidesPf6N2E2_995 and Pf6N2E2_996 are separated by 85 nucleotides Pf6N2E2_992 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 1,160,666 to 1,161,694 _992 Pf6N2E2_993 - Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1), at 1,161,691 to 1,163,196 _993 Pf6N2E2_994 - NADH-dependent dehydrogenase, at 1,163,506 to 1,164,594 _994 Pf6N2E2_995 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 1,164,695 to 1,165,498 _995 Pf6N2E2_996 - Stress responsive alpha-beta barrel domain protein Dabb, at 1,165,584 to 1,165,889 _996
Group Condition Pf6N2E2_992 Pf6N2E2_993 Pf6N2E2_994 Pf6N2E2_995 Pf6N2E2_996
stress Nickel (II) chloride 1 mM -0.7 -0.7 -0.1 -0.2 N.D.
stress DEANONOate 0.000625 M -0.5 -0.5 -0.3 -0.3 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.6 -0.3 -0.4 -0.1 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -0.6 -0.2 -0.5 -0.1 N.D.
stress Nickel (II) chloride 0.0025 M -0.4 -0.2 -0.5 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep A; time point 3 -0.5 -0.5 -0.3 -0.0 N.D.
carbon source Ying_Nucleobase14 rep B; time point 2 -0.6 -0.2 -0.3 -0.2 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -0.4 -0.4 -0.4 +0.1 N.D.
stress DEANONOate 0.000625 M -0.4 -0.6 -0.4 +0.3 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.5 -0.1 -0.4 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.5 -0.6 -0.3 +0.2 N.D.
stress Cobalt chloride 0.4 mM -0.5 -0.4 -0.1 -0.2 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.6 -0.5 -0.1 +0.1 N.D.
carbon source Ying_all64 rep C; time point 3 -0.4 -0.4 -0.3 +0.1 N.D.
carbon source Ying_all64 rep A; time point 3 -0.4 -0.4 -0.3 +0.1 N.D.
carbon source Ying_all64 rep B; time point 3 -0.4 -0.3 -0.2 +0.2 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A +0.4 -0.5 +0.0 -0.4 N.D.
stress Aluminum chloride 0.00005 M -0.4 -0.4 +0.3 +0.0 N.D.
carbon source Ying_Others16 rep C; time point 1 -0.3 +0.4 -0.3 -0.3 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM +0.4 -0.3 -0.2 -0.3 N.D.
stress Cobalt chloride 0.6 mM -0.5 +0.2 +0.2 -0.3 N.D.
carbon source Carbon source Sucrose 2.5 mM +0.3 +0.3 -0.5 -0.2 N.D.
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml +0.6 -0.2 -0.1 -0.4 N.D.
stress sodium iodate 0.005 M +0.6 -0.5 -0.1 +0.0 N.D.
stress RCH2 defined with Cobalt chloride 0.02 mM +0.3 +0.3 +0.2 -0.7 N.D.
stress Hydroxylamine 0.5 M -0.6 +0.5 +0.1 +0.2 N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM +0.4 +0.3 -0.0 -0.4 N.D.
carbon source RCH2_defined +0.6 -0.1 +0.2 -0.3 N.D.
carbon source Ying_sugar7 rep B; time point 2 +0.2 +0.6 -0.3 -0.1 N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM +0.7 +0.6 +0.5 -0.2 N.D.
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