Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_987 and Pf6N2E2_988 are separated by 247 nucleotidesPf6N2E2_988 and Pf6N2E2_989 are separated by 106 nucleotidesPf6N2E2_989 and Pf6N2E2_990 are separated by 63 nucleotidesPf6N2E2_990 and Pf6N2E2_991 are separated by 27 nucleotides Pf6N2E2_987 - hypothetical protein, at 1,155,380 to 1,155,616 _987 Pf6N2E2_988 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27), at 1,155,864 to 1,156,721 _988 Pf6N2E2_989 - Transcriptional regulator, LysR family, at 1,156,828 to 1,157,742 _989 Pf6N2E2_990 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 1,157,806 to 1,158,600 _990 Pf6N2E2_991 - Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1), at 1,158,628 to 1,159,590 _991
Group Condition Pf6N2E2_987 Pf6N2E2_988 Pf6N2E2_989 Pf6N2E2_990 Pf6N2E2_991
stress RCH2 defined with Cobalt chloride 0.04 mM -0.8 -1.0 -0.1 -0.4 -0.5
stress Fluorophosphate 0.125 M -1.4 -0.5 -0.0 -0.5 -0.1
stress Nalidixic 0.004 mg/ml -2.1 -0.2 -0.2 -0.1 +0.0
stress chromate 0.000005 M -1.6 -0.8 -0.0 +0.0 -0.1
stress thiosulfate 0.25 M -2.4 +0.4 -0.2 -0.2 +0.1
nitrogen source L-Glutamic (N) -1.8 -0.4 +0.1 +0.0 -0.3
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B -1.8 -0.2 -0.0 -0.1 +0.0
carbon source D-Trehalose (C) -1.6 +0.0 -0.3 +0.1 -0.2
carbon source RCH2_defined -1.6 +0.6 -0.4 -0.2 -0.4
nitrogen source L-Serine (N) -0.8 -1.0 -0.1 +0.5 -0.3
motility outer cut, LB soft agar motility assay -1.9 +0.1 +0.1 -0.2 +0.3
carbon source RCH2_defined -1.6 +0.4 -0.2 -0.3 +0.3
stress Bile salts 0.0125 M -1.4 +0.7 -0.1 +0.3 -0.5
stress RCH2 defined with Zinc 0.032 mM -1.7 +0.0 +0.2 +0.1 +0.5
stress RCH2 defined with Cobalt chloride 0.02 mM -1.3 +0.7 -0.2 +0.2 -0.2
stress sodium iodate 0.005 M -1.4 +0.9 +0.1 -0.3 -0.1
stress arsenate 0.0005 M +1.2 -0.8 +0.2 -0.0 +0.2
motility inner cut, LB soft agar motility assay +1.0 -0.4 +0.1 -0.6 +0.7
nitrogen source nitrogen source nitrite 0.5mM +1.6 +0.3 -0.0 +0.0 -0.9
nitrogen source nitrogen source nitrite 1mM +1.8 -0.5 -0.1 -0.2 +0.2
nitrogen source nitrogen source nitrite 0.5mM +1.8 -0.4 +0.1 -0.4 +0.2
carbon source D-Galactose (C) +1.2 +0.3 -0.2 +0.6 -0.1
lb LB no stress 24 hours +1.6 +0.2 +0.0 -0.2 +0.2
stress Nickel (II) chloride 1.5 mM +1.1 +0.8 +0.2 +0.3 -0.2
stress Nickel (II) chloride 1 mM +1.2 +0.8 +0.1 +0.1 +0.0
stress Cobalt chloride 0.6 mM +2.2 +0.5 +0.1 -0.5 +0.0
stress Nickel (II) chloride 1.5 mM +2.0 -0.4 -0.0 +0.5 +0.5
stress Cobalt chloride 0.6 mM +2.5 +0.2 +0.0 +0.1 -0.0
stress Cobalt chloride 0.4 mM +1.9 +0.5 +0.0 +0.4 +0.2
stress Cobalt chloride 0.6 mM +2.2 +1.2 +0.0 +0.3 -0.1
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