Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_981 and Pf6N2E2_982 are separated by 111 nucleotidesPf6N2E2_982 and Pf6N2E2_983 are separated by 2864 nucleotidesPf6N2E2_983 and Pf6N2E2_984 are separated by 232 nucleotidesPf6N2E2_984 and Pf6N2E2_985 are separated by 217 nucleotides Pf6N2E2_981 - Transcriptional regulator in PFGI-1-like cluster, at 1,148,609 to 1,148,839 _981 Pf6N2E2_982 - FIG041388: hypothetical protein in PFGI-1-like cluster, at 1,148,951 to 1,149,124 _982 Pf6N2E2_983 - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases, at 1,151,989 to 1,152,981 _983 Pf6N2E2_984 - FIG00553873: hypothetical protein, at 1,153,214 to 1,153,591 _984 Pf6N2E2_985 - Multidrug resistance transporter, Bcr/CflA family, at 1,153,809 to 1,154,945 _985
Group Condition Pf6N2E2_981 Pf6N2E2_982 Pf6N2E2_983 Pf6N2E2_984 Pf6N2E2_985
lb LB no stress 24 hours -0.3 N.D. -0.0 -0.5 -0.1
nitrogen source nitrogen source nitrite 5mM -0.3 N.D. -0.1 -0.3 -0.2
stress sodium iodide 0.125 M +0.0 N.D. +0.1 -0.7 -0.2
nitrogen source L-Isoleucine (N) -0.3 N.D. -0.2 -0.3 +0.1
stress deoxycholate 0.0125 M -0.1 N.D. -0.3 -0.5 +0.1
carbon source Ying_all64 rep A; time point 3 +0.1 N.D. -0.1 -0.5 -0.3
stress bromate 0.05 M -0.2 N.D. -0.2 -0.4 +0.1
motility inner cut, LB soft agar motility assay +0.3 N.D. -0.3 -0.2 -0.1
stress Bile salts 0.0125 M +0.2 N.D. +0.2 -0.0 -0.7
nitrogen source nitrogen source nitrite 1mM -0.2 N.D. -0.1 +0.3 -0.2
lb LB no stress 48 hours +0.3 N.D. +0.1 -0.4 -0.1
stress thiosulfate 0.25 M +0.2 N.D. +0.2 -0.4 -0.1
stress Gjerstad humics 0.5 M +0.2 N.D. +0.0 -0.4 +0.1
stress Nickel (II) chloride 1 mM +0.5 N.D. +0.1 -0.3 -0.1
stress Aluminum chloride 4 mM +0.2 N.D. +0.2 -0.3 +0.1
motility inner cut, LB soft agar motility assay +0.3 N.D. +0.3 -0.2 +0.0
vitamin With vitamins t1 -0.2 N.D. +0.0 +0.1 +0.5
carbon source octanoate (C) +0.6 N.D. -0.0 +0.1 -0.2
carbon source Carbon source Sucrose 10 mM +0.3 N.D. -0.1 +0.4 -0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.0 N.D. +0.2 -0.1 +0.5
carbon source octanoate (C) +0.5 N.D. +0.2 +0.1 -0.3
stress Chloride 600 mM -0.2 N.D. +0.3 +0.4 +0.2
stress Cobalt chloride 0.4 mM +0.5 N.D. +0.1 +0.3 -0.1
stress Cobalt chloride 0.6 mM +0.4 N.D. +0.0 -0.0 +0.5
stress Nickel (II) chloride 1 mM +0.5 N.D. +0.3 +0.3 -0.0
stress Cobalt chloride 0.4 mM +0.6 N.D. +0.2 +0.3 -0.1
nitrogen source L-Serine (N) +0.4 N.D. +0.2 +0.2 +0.6
stress Cobalt chloride 0.6 mM +0.5 N.D. +0.0 +0.1 +1.0
stress Cobalt chloride 0.6 mM +0.5 N.D. -0.0 +0.1 +1.1
stress Cobalt chloride 0.6 mM +0.6 N.D. +0.3 +0.4 +1.0
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