Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_798 and Pf6N2E2_799 overlap by 48 nucleotidesPf6N2E2_799 and Pf6N2E2_800 are separated by 49 nucleotidesPf6N2E2_800 and Pf6N2E2_801 are separated by 47 nucleotidesPf6N2E2_801 and Pf6N2E2_802 are separated by 342 nucleotides Pf6N2E2_798 - Ku domain protein, at 930,292 to 931,182 _798 Pf6N2E2_799 - hypothetical protein, at 931,135 to 931,344 _799 Pf6N2E2_800 - FIG00962948: hypothetical protein, at 931,394 to 931,723 _800 Pf6N2E2_801 - Soluble aldose sugar dehydrogenase, PQQ-dependent (EC 1.1.5.-), at 931,771 to 932,919 _801 Pf6N2E2_802 - Threonine dehydratase biosynthetic (EC 4.3.1.19), at 933,262 to 934,269 _802
Group Condition Pf6N2E2_798 Pf6N2E2_799 Pf6N2E2_800 Pf6N2E2_801 Pf6N2E2_802
nitrogen source L-Serine (N) +0.3 -0.1 -0.3 -0.4 -2.2
nitrogen source L-Serine (N) +0.3 +0.1 -0.6 +0.1 -2.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.2 -1.5 -0.1 -0.2 -0.1
carbon source Ying_Nucleobase14 rep A; time point 3 -0.6 -1.4 +0.0 +0.2 -0.2
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.0 -1.5 +0.0 -0.1 -0.3
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -1.8 -0.1 +0.0 +0.2
carbon source Ying_all64 rep A; time point 3 -0.1 -1.4 -0.1 -0.0 -0.3
stress RCH2 defined with Cobalt chloride 0.04 mM -1.0 -0.8 -0.0 -0.0 +0.1
carbon source Ying_Nucleobase14 rep C; time point 3 -0.2 -1.4 -0.0 -0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -0.0 -1.4 -0.1 -0.2 +0.0
carbon source Ying_AminoAcid20 rep A; time point 3 -0.3 -1.4 +0.0 -0.0 -0.0
carbon source Ying_Others16 rep A; time point 3 -0.1 -1.1 +0.0 -0.4 -0.0
carbon source Ying_Nucleobase14 rep B; time point 3 +0.1 -1.4 -0.1 -0.1 -0.1
stress Rifampicin 0.003 mg/ml -0.4 -1.0 -0.2 +0.1 -0.1
carbon source Ying_all64 rep B; time point 3 -0.1 -1.4 +0.0 +0.1 -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -1.4 +0.0 -0.1 -0.0
carbon source Ying_Others16 rep B; time point 3 +0.1 -1.2 -0.0 -0.4 +0.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.8 -0.8 +0.2 -0.0 +0.1
carbon source Ying_all64 rep C; time point 3 +0.3 -1.4 -0.1 +0.0 -0.1
motility inner cut, LB soft agar motility assay -0.3 -0.8 -0.3 +0.2 +0.1
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.3 -1.5 +0.1 +0.2 -0.1
stress RCH2 defined with copper (II) chloride 0.03 mM -0.3 -1.0 +0.3 +0.2 -0.1
stress Aluminum chloride 0.00005 M +0.4 -0.9 -0.1 -0.0 +0.3
stress Hydroxylamine 0.5 M -1.1 +0.5 -0.1 -0.1 +0.4
nitrogen source nitrogen source nitrite 0.5mM -0.7 +0.8 -0.2 -0.1 +0.3
stress perchlorate 0.125 M +0.7 -0.3 -0.1 -0.5 +0.4
stress Fusidic 0.4 mg/ml +0.3 +0.9 -1.0 +0.0 +0.1
stress selenate 0.5 M +0.4 +0.4 -0.2 -0.3 +0.4
nitrogen source nitrogen source nitrate 5mM -0.1 +0.7 +0.3 -0.4 +0.4
stress bromate 0.05 M +0.7 +0.4 -0.2 -0.1 +0.4
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