Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_757 and Pf6N2E2_758 overlap by 4 nucleotidesPf6N2E2_758 and Pf6N2E2_759 are separated by 8 nucleotidesPf6N2E2_759 and Pf6N2E2_760 are separated by 163 nucleotidesPf6N2E2_760 and Pf6N2E2_761 are separated by 95 nucleotides Pf6N2E2_757 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 866,960 to 867,940 _757 Pf6N2E2_758 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 867,937 to 869,457 _758 Pf6N2E2_759 - HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217), at 869,466 to 870,275 _759 Pf6N2E2_760 - Na+/H+ antiporter NhaB, at 870,439 to 871,941 _760 Pf6N2E2_761 - Hemolysin-type calcium-binding region, at 872,037 to 873,326 _761
Group Condition Pf6N2E2_757 Pf6N2E2_758 Pf6N2E2_759 Pf6N2E2_760 Pf6N2E2_761
stress copper (II) chloride 3 mM +0.5 -0.2 -0.4 -5.1 -0.1
nitrogen source Gly-Glu (N) -0.4 -0.1 -0.4 -4.2 +0.1
nitrogen source L-Proline (N) -0.5 +0.0 -0.1 -4.4 -0.0
nitrogen source L-Aspartic Acid (N) -0.2 -0.1 -0.3 -3.9 -0.2
nitrogen source L-Proline (N) -0.2 -0.0 -0.1 -4.1 -0.0
stress Gjerstad humics 0.5 M +0.2 -0.0 +0.1 -4.6 -0.1
stress Nickel (II) chloride 1.5 mM -0.3 -0.1 -0.4 -3.3 -0.2
stress Cephalothin 4 mg/ml -0.0 -0.1 -0.1 -4.1 -0.0
nitrogen source L-Aspartic Acid (N) -0.5 -0.0 +0.1 -4.1 +0.3
stress Gjerstad humics 0.5 M +0.1 -0.0 -0.0 -4.0 -0.0
stress Nickel (II) chloride 1.5 mM -0.2 +0.1 +0.0 -3.3 -0.5
stress Nickel (II) chloride 1.5 mM -0.2 -0.0 -0.3 -3.2 -0.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B +0.2 -0.1 -0.4 -3.4 -0.1
stress Nickel (II) chloride 0.0025 M -0.2 -0.0 -0.1 -2.7 -0.7
stress Hydrochloric Acid 0.005 M +0.2 -0.0 +0.1 -3.6 -0.2
carbon source Carnitine Hydrochloride (C) -0.2 +0.0 +0.1 -3.4 +0.0
stress sodium iodate 0.005 M +0.4 -0.2 -0.3 -3.2 -0.1
stress Nickel (II) chloride 1.5 mM -0.5 -0.0 -0.2 -2.5 +0.0
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A -0.5 +0.1 +0.1 -3.0 +0.0
stress RCH2 defined with copper (II) chloride 0.03 mM +0.1 -0.3 -0.2 -2.5 -0.5
nitrogen source Gly-Glu (N) +0.2 -0.2 -0.3 -3.3 +0.4
stress RCH2 defined with copper (II) chloride 0.03 mM +0.2 -0.2 -0.6 -2.6 +0.2
stress Cobalt chloride 0.6 mM -0.1 -0.6 -1.0 -0.5 -1.0
stress RCH2 defined with Cobalt chloride 0.02 mM -0.1 -0.1 -0.5 -2.3 -0.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C -0.4 -0.0 +0.4 -2.7 -0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -0.3 -0.4 -2.2 +0.2
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.1 -0.1 -0.3 -2.2 +0.3
stress RCH2 defined with Cobalt chloride 0.02 mM +0.4 -0.3 -0.1 -2.3 +0.1
carbon source RCH2_defined +0.3 -0.1 -0.3 -2.2 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM +0.3 -0.1 -0.0 -2.5 +0.2
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