Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_755 and Pf6N2E2_756 are separated by 373 nucleotidesPf6N2E2_756 and Pf6N2E2_757 are separated by 274 nucleotidesPf6N2E2_757 and Pf6N2E2_758 overlap by 4 nucleotidesPf6N2E2_758 and Pf6N2E2_759 are separated by 8 nucleotides Pf6N2E2_755 - UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide, at 864,399 to 866,138 _755 Pf6N2E2_756 - hypothetical protein, at 866,512 to 866,685 _756 Pf6N2E2_757 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 866,960 to 867,940 _757 Pf6N2E2_758 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 867,937 to 869,457 _758 Pf6N2E2_759 - HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217), at 869,466 to 870,275 _759
Group Condition Pf6N2E2_755 Pf6N2E2_756 Pf6N2E2_757 Pf6N2E2_758 Pf6N2E2_759
stress Cobalt chloride 0.6 mM -0.2 -1.4 -0.1 -0.6 -1.0
stress Aluminum chloride 2 mM -2.5 -0.1 -0.2 +0.1 -0.1
stress Zinc chloride 0.0000015625 M -2.5 +0.3 -0.8 -0.0 +0.2
carbon source Ying_sugar7 rep C; time point 1 -0.5 -1.3 -0.3 -0.1 -0.6
stress molybdate 0.25 M +0.3 -1.3 -0.6 -0.5 -0.0
stress tungstate 0.05 M -0.3 -1.8 -0.1 +0.1 +0.1
stress Aluminum chloride 4 mM -1.8 -0.4 +0.2 +0.2 -0.2
carbon source D-Galactose (C) -1.4 +0.1 -0.4 -0.2 -0.0
carbon source D-Galactose (C) -1.0 -0.3 -0.1 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -0.1 -1.2 -0.3 -0.1 +0.0
stress dimethyl sulfone 0.25 M -0.1 -1.0 -0.1 -0.3 -0.0
stress Fluorophosphate 0.125 M +0.1 -1.0 -0.3 -0.3 +0.1
stress thiosulfate 0.25 M +0.1 -0.8 -0.2 -0.3 -0.2
stress tungstate 0.05 M +0.1 -1.4 -0.2 -0.0 +0.1
stress Fluorophosphate 0.125 M +0.2 -0.3 -0.9 -0.2 -0.1
carbon source Ying_AminoAcid20 rep B; time point 3 +0.1 -0.7 -0.5 -0.1 +0.1
stress dimethyl sulfone 0.25 M +0.1 -0.8 +0.2 -0.1 -0.3
carbon source D-Trehalose (C) +0.4 -0.1 -0.2 -0.2 -0.6
stress Aluminum chloride 0.00005 M -0.2 -1.0 +0.3 +0.0 +0.1
nitrogen source Gly-Glu (N) +0.3 +0.2 -0.4 -0.1 -0.4
stress copper (II) chloride 3 mM +0.1 -0.3 +0.5 -0.2 -0.4
stress Phosphomycin 0.004 mg/ml -0.1 -0.0 +0.8 -0.1 -0.8
nitrogen source L-Proline (N) +0.9 +0.2 -0.5 +0.0 -0.1
carbon source Ying_sugar7 rep B; time point 2 -0.7 +0.1 +0.8 -0.0 +0.4
stress Bile salts 0.0125 M +0.1 -0.5 +0.8 +0.1 +0.1
nitrogen source Cytidine (N) +0.7 +0.6 -0.1 -0.2 -0.2
nitrogen source Cytidine (N) +0.7 +0.2 +0.3 +0.1 -0.5
stress Rifampicin 0.003 mg/ml -0.4 +0.4 +1.0 -0.1 +0.1
stress DEANONOate 0.000625 M -0.1 +0.3 +0.3 -0.1 +0.6
stress Doxycycline hyclate 0.0001 mg/ml +0.3 +1.1 +1.5 +0.2 -0.0
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