Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_689 and Pf6N2E2_690 are separated by 259 nucleotidesPf6N2E2_690 and Pf6N2E2_691 are separated by 108 nucleotidesPf6N2E2_691 and Pf6N2E2_692 overlap by 4 nucleotidesPf6N2E2_692 and Pf6N2E2_693 are separated by 274 nucleotides Pf6N2E2_689 - FIG00956189: hypothetical protein, at 795,286 to 795,780 _689 Pf6N2E2_690 - Transcriptional regulator, LysR family, at 796,040 to 796,936 _690 Pf6N2E2_691 - D-galactarate permease, at 797,045 to 798,442 _691 Pf6N2E2_692 - Glucarate dehydratase (EC 4.2.1.40), at 798,439 to 799,713 _692 Pf6N2E2_693 - hypothetical protein, at 799,988 to 800,125 _693
Group Condition Pf6N2E2_689 Pf6N2E2_690 Pf6N2E2_691 Pf6N2E2_692 Pf6N2E2_693
stress Cobalt chloride 0.6 mM +0.1 -0.1 -0.1 +0.7 -1.9
stress Hydrochloric Acid 0.005 M +0.0 +0.1 +0.0 +0.7 -2.1
stress Hydroxylamine 0.5 M +0.6 +0.1 +0.3 -0.4 -1.6
stress RCH2 defined with copper (II) chloride 0.03 mM -1.5 -0.1 -0.2 +0.4 +0.5
motility inner cut, LB soft agar motility assay -0.6 -0.6 +0.1 -0.5 +0.7
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml -1.6 -0.2 -0.2 +0.1 +1.2
stress arsenate 0.0005 M +0.8 -0.3 +0.1 +0.3 -1.0
stress Chloride 0.5 M +1.2 -0.7 -0.3 -0.1 -0.2
nitrogen source L-Serine (N) +0.2 +0.4 -0.1 -1.2 +0.7
stress RCH2 defined with Cobalt chloride 0.04 mM -0.6 +0.3 +0.0 -0.4 +1.1
nitrogen source nitrogen source nitrate 20mM -0.8 +0.7 -0.2 +0.1 +0.7
carbon source Carbon source Sucrose 10 mM +1.8 +0.2 -0.0 -0.0 -1.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.8 +0.6 +0.0 +0.1 +1.3
nitrogen source L-Proline (N) +0.9 +0.6 -0.1 -0.5 +0.3
stress Bile salts 0.0125 M +1.0 +0.3 +0.1 -1.5 +1.4
vitamin No vitamins t1 +0.7 -0.3 +0.2 +0.2 +1.5
carbon source D-Mannose (C) +0.6 +0.6 +0.1 +0.9 +0.2
carbon source D-Glucosamine Hydrochloride (C) -0.4 +0.2 +0.4 +0.9 +1.5
carbon source m-Inositol (C) +0.6 +0.3 +0.4 +0.7 +0.8
carbon source Ying_Nucleobase14 rep B; time point 3 +0.4 +0.1 +0.2 +0.8 +1.2
carbon source L-Alanine (C) +1.1 +0.4 +0.2 +0.2 +0.9
carbon source Ying_Nucleobase14 rep C; time point 3 +0.3 +0.0 +0.4 +1.0 +1.4
carbon source D-Alanine (C) +0.6 +0.3 +0.4 +0.7 +1.2
carbon source Glycerol (C) +0.1 +0.6 +0.4 +0.8 +1.3
carbon source Tween 20 (C) +0.7 +0.4 +0.3 +0.9 +1.2
carbon source D-Xylose (C) +0.3 +0.3 +0.5 +0.9 +1.5
carbon source D-Glucosamine Hydrochloride (C) +1.1 +0.3 +0.6 +0.9 +2.0
carbon source D-Fructose (C) +1.1 +0.8 +0.6 +1.1 +1.9
carbon source D-Galactose (C) -0.3 +0.9 +0.9 +2.2 +2.8
carbon source D-Galactose (C) +1.0 +1.1 +1.1 +2.4 +3.7
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