Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_650 and Pf6N2E2_651 overlap by 4 nucleotidesPf6N2E2_651 and Pf6N2E2_652 are separated by 172 nucleotidesPf6N2E2_652 and Pf6N2E2_653 overlap by 1 nucleotidesPf6N2E2_653 and Pf6N2E2_654 are separated by 532 nucleotides Pf6N2E2_650 - General secretion pathway protein M, at 738,852 to 739,400 _650 Pf6N2E2_651 - General secretion pathway protein D, at 739,397 to 741,760 _651 Pf6N2E2_652 - General secretion pathway protein E, at 741,933 to 743,351 _652 Pf6N2E2_653 - General secretion pathway protein F, at 743,351 to 744,562 _653 Pf6N2E2_654 - Phosphate-binding DING protein (related to PstS), at 745,095 to 746,279 _654
Group Condition Pf6N2E2_650 Pf6N2E2_651 Pf6N2E2_652 Pf6N2E2_653 Pf6N2E2_654
motility inner cut, LB soft agar motility assay -0.5 -0.4 -1.8 +0.3 +0.0
carbon source Ying_AminoAcid20 rep B; time point 2 -1.2 -0.2 -0.3 -0.5 -0.1
carbon source Ying_Others16 rep A; time point 2 -1.3 -0.1 -0.6 -0.3 -0.0
stress Chlorite 0.00005 M -0.6 +0.1 -0.7 -0.5 -0.4
nitrogen source Glucuronamide (N) -0.1 -0.2 -1.0 +0.1 -0.6
carbon source Ying_OrganicAcid7 rep A; time point 2 -1.2 -0.1 -0.2 +0.1 -0.3
carbon source Ying_AminoAcid20 rep C; time point 2 -1.5 +0.0 +0.1 -0.1 -0.2
carbon source Ying_Nucleobase14 rep B; time point 2 -1.2 -0.2 +0.0 -0.3 -0.0
carbon source Ying_OrganicAcid7 rep C; time point 3 -1.5 -0.4 +0.2 +0.0 +0.0
carbon source Ying_Nucleobase14 rep A; time point 3 -0.9 -0.5 +0.2 -0.3 -0.1
carbon source Ying_all64 rep A; time point 3 -1.2 -0.0 +0.0 -0.4 +0.0
carbon source Ying_Others16 rep C; time point 1 -1.2 +0.2 -0.3 -0.1 -0.0
carbon source Ying_AminoAcid20 rep B; time point 3 -0.9 -0.2 +0.1 -0.4 +0.1
carbon source Ying_Others16 rep A; time point 1 -0.7 +0.2 -0.2 -0.4 -0.2
stress selenate 0.5 M -0.3 +0.1 -1.0 +0.2 -0.3
carbon source Ying_sugar7 rep B; time point 1 -0.8 +0.1 -0.5 +0.3 -0.1
stress bromate 0.05 M +0.3 +0.1 -0.8 -0.7 +0.1
vitamin With vitamins t2 -0.3 +0.2 -0.6 +0.2 -0.2
stress RCH2 defined with copper (II) chloride 0.03 mM -0.9 +0.2 +0.4 -0.4 -0.1
carbon source Ying_AminoAcid20 rep C; time point 3 -1.0 -0.2 +0.4 +0.1 -0.0
stress tungstate 0.05 M +0.5 +0.1 -0.9 -0.5 +0.1
stress RCH2 defined with Cobalt chloride 0.02 mM +0.2 +0.4 -0.5 -0.3 -0.3
carbon source D-Gluconic Acid (C) +0.5 -0.0 -0.9 -0.1 +0.3
stress Aluminum chloride 4 mM -0.2 -0.1 +1.0 +0.2 -0.3
nitrogen source L-Serine (N) -0.1 +0.7 -0.6 +0.5 +0.2
stress thiosulfate 0.25 M +0.6 +0.1 -0.5 +0.3 +0.2
stress deoxycholate 0.0125 M +1.0 +0.3 -0.5 -0.0 +0.5
nitrogen source L-Serine (N) -0.0 +0.6 +0.8 +0.2 -0.2
motility outer cut, LB soft agar motility assay +0.3 +0.4 +0.3 +0.3 +0.4
stress Bile salts 0.0125 M +0.5 +0.5 +0.4 +0.6 -0.2
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