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Gene
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Nearby
Cofit
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_52 and Pf6N2E2_53 are separated by 224 nucleotides
Pf6N2E2_53 and Pf6N2E2_6096 are separated by 146 nucleotides
Pf6N2E2_6096 and Pf6N2E2_6097 are separated by 82 nucleotides
Pf6N2E2_6097 and Pf6N2E2_6098 are separated by 56 nucleotides
Pf6N2E2_52 - Excinuclease ABC subunit B, at 90,316 to 92,331
_52
Pf6N2E2_53 - Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24), at 92,556 to 94,037
_53
Pf6N2E2_6096 - tRNA-Ala-GGC, at 94,184 to 94,256
_6096
Pf6N2E2_6097 - tRNA-Glu-TTC, at 94,339 to 94,411
_6097
Pf6N2E2_6098 - tRNA-Ala-GGC, at 94,468 to 94,540
_6098
Group
Condition
Pf6N2E2
_52
Pf6N2E2
_53
Pf6N2E2
_6096
Pf6N2E2
_6097
Pf6N2E2
_6098
stress
Cisplatin 0.008 mg/ml
-5.4
N.D.
N.D.
N.D.
N.D.
stress
chromate 0.0000015625 M
-2.9
N.D.
N.D.
N.D.
N.D.
stress
periodate 0.00125 M
-2.2
N.D.
N.D.
N.D.
N.D.
stress
chromate 0.0000015625 M
-2.0
N.D.
N.D.
N.D.
N.D.
stress
Chloride 600 mM
-1.2
N.D.
N.D.
N.D.
N.D.
stress
Bile salts 0.0125 M
-1.2
N.D.
N.D.
N.D.
N.D.
stress
molybdate 0.25 M
-1.2
N.D.
N.D.
N.D.
N.D.
stress
Choline Lysine 20 mM
-1.2
N.D.
N.D.
N.D.
N.D.
stress
Calcium chloride 0.0125 M
-1.1
N.D.
N.D.
N.D.
N.D.
stress
deoxycholate 0.0125 M
-1.1
N.D.
N.D.
N.D.
N.D.
stress
D-Cycloserine 0.12 mg/ml
-1.1
N.D.
N.D.
N.D.
N.D.
stress
molybdate 0.25 M
-1.1
N.D.
N.D.
N.D.
N.D.
stress
thiosulfate 0.25 M
-1.0
N.D.
N.D.
N.D.
N.D.
stress
Calcium chloride 0.0125 M
-1.0
N.D.
N.D.
N.D.
N.D.
stress
Vancomycin 0.24 mg/ml
-1.0
N.D.
N.D.
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
-0.9
N.D.
N.D.
N.D.
N.D.
stress
Magnesium chloride 0.125 M
-0.9
N.D.
N.D.
N.D.
N.D.
stress
DEANONOate 0.000625 M
-0.8
N.D.
N.D.
N.D.
N.D.
stress
Chloride 500 mM
-0.8
N.D.
N.D.
N.D.
N.D.
stress
phosphite 0.25 M
-0.7
N.D.
N.D.
N.D.
N.D.
stress
nitrate 200 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
Phosphomycin 0.004 mg/ml
-0.7
N.D.
N.D.
N.D.
N.D.
stress
thiosulfate 0.25 M
-0.7
N.D.
N.D.
N.D.
N.D.
motility
inner cut, LB soft agar motility assay
-0.7
N.D.
N.D.
N.D.
N.D.
stress
5-Hydroxymethylfurfural 10 mM
-0.7
N.D.
N.D.
N.D.
N.D.
stress
Ceftazidime 0.15 mg/ml
-0.7
N.D.
N.D.
N.D.
N.D.
stress
Chloride 0.5 M
-0.7
N.D.
N.D.
N.D.
N.D.
stress
L-Lysine 25 mM
-0.6
N.D.
N.D.
N.D.
N.D.
stress
Fluorophosphate 0.125 M
-0.6
N.D.
N.D.
N.D.
N.D.
motility
outer cut, LB soft agar motility assay
-0.6
N.D.
N.D.
N.D.
N.D.
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