Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_6089 and Pf6N2E2_6090 are separated by 99 nucleotidesPf6N2E2_6090 and Pf6N2E2_6091 overlap by 32 nucleotidesPf6N2E2_6091 and Pf6N2E2_6092 are separated by 28 nucleotidesPf6N2E2_6092 and Pf6N2E2_6093 are separated by 596 nucleotides Pf6N2E2_6089 - ThiJ/PfpI family protein, at 6,913,218 to 6,913,904 _6089 Pf6N2E2_6090 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 6,914,004 to 6,914,996 _6090 Pf6N2E2_6091 - Epoxide hydrolase (EC 3.3.2.9), at 6,914,965 to 6,915,867 _6091 Pf6N2E2_6092 - hypothetical protein, at 6,915,896 to 6,916,273 _6092 Pf6N2E2_6093 - hypothetical protein, at 6,916,870 to 6,917,235 _6093
Group Condition Pf6N2E2_6089 Pf6N2E2_6090 Pf6N2E2_6091 Pf6N2E2_6092 Pf6N2E2_6093
stress Hydrochloric Acid 0.005 M -0.7 -2.0 -0.1 N.D. -0.9
nitrogen source Cytosine (N) +0.0 -2.9 +0.0 N.D. -0.5
vitamin No vitamins t2 +0.3 -2.2 -0.1 N.D. -1.2
nitrogen source L-Aspartic Acid (N) -0.7 -2.2 +0.3 N.D. -0.2
nitrogen source nitrogen source nitrate 20mM +0.1 -1.1 -0.0 N.D. -1.7
carbon source RCH2_defined -0.3 -0.4 -0.1 N.D. -1.9
nitrogen source nitrogen source nitrate 5mM -0.7 +0.2 -0.1 N.D. -2.0
nitrogen source nitrogen source nitrite 0.5mM +0.0 -0.5 -0.6 N.D. -1.5
nitrogen source L-Serine (N) -0.3 -1.6 +0.2 N.D. -0.6
carbon source D-Trehalose (C) +0.1 -2.7 -0.1 N.D. +0.4
motility inner cut, LB soft agar motility assay +0.4 -1.2 +0.3 N.D. -1.8
nitrogen source L-Alanine (N) -0.2 -1.6 +0.1 N.D. -0.4
carbon source Carbon source Sucrose 2.5 mM -0.2 -1.7 +0.3 N.D. -0.5
motility outer cut, LB soft agar motility assay -0.0 -1.5 -0.5 N.D. +0.4
stress Zinc chloride 0.0000015625 M -1.3 -0.1 +0.5 N.D. -0.7
nitrogen source L-Arginine (N) +0.1 -1.7 -0.1 N.D. +0.4
nitrogen source nitrogen source nitrite 0.5mM +0.0 +0.8 -0.0 N.D. -2.1
carbon source D-Fructose (C) +0.6 -1.5 +0.0 N.D. -0.4
stress Bile salts 0.0125 M +0.5 +0.3 -0.3 N.D. -1.4
nitrogen source L-Serine (N) -0.5 -1.1 +0.2 N.D. +0.7
nitrogen source nitrogen source nitrite 1mM -0.6 +1.3 -0.4 N.D. -0.8
stress RCH2 defined with Cobalt chloride 0.02 mM +0.3 +1.2 -0.0 N.D. -1.7
stress RCH2 defined with Cobalt chloride 0.04 mM +0.6 -1.5 +0.1 N.D. +0.6
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.6 +1.1 -0.1 N.D. -0.5
motility inner cut, LB soft agar motility assay +0.3 -1.5 +0.3 N.D. +0.7
carbon source D-Trehalose (C) +0.3 -0.9 -0.2 N.D. +0.9
stress Cobalt chloride 0.6 mM -0.3 +1.1 +0.5 N.D. -0.7
stress RCH2 defined with Cobalt chloride 0.04 mM +0.3 +1.7 +0.1 N.D. -0.5
stress molybdate 0.25 M +0.6 +0.8 -0.0 N.D. +0.8
nitrogen source Glucuronamide (N) +0.0 +1.2 +0.4 N.D. +0.7
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