Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_603 and Pf6N2E2_604 are separated by 13 nucleotidesPf6N2E2_604 and Pf6N2E2_605 are separated by 403 nucleotidesPf6N2E2_605 and Pf6N2E2_606 are separated by 43 nucleotidesPf6N2E2_606 and Pf6N2E2_607 are separated by 807 nucleotides Pf6N2E2_603 - FIG00953934: hypothetical protein, at 677,272 to 678,102 _603 Pf6N2E2_604 - Membrane alanine aminopeptidase N (EC 3.4.11.2), at 678,116 to 680,773 _604 Pf6N2E2_605 - FIG002465: BNR repeat protein, at 681,177 to 682,214 _605 Pf6N2E2_606 - FIG005548: transport protein, at 682,258 to 684,633 _606 Pf6N2E2_607 - hypothetical protein, at 685,441 to 690,153 _607
Group Condition Pf6N2E2_603 Pf6N2E2_604 Pf6N2E2_605 Pf6N2E2_606 Pf6N2E2_607
carbon source Tween 20 (C) -0.4 -0.1 -3.5 -3.3 +0.0
carbon source Tween 20 (C) -0.0 -0.0 -3.1 -2.8 -0.1
stress deoxycholate 0.0125 M -0.4 -0.4 -2.7 +0.1 -0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.3 -0.2 -2.5 -0.0 -0.0
nitrogen source nitrogen source nitrite 0.5mM -0.6 -0.2 -1.8 -0.2 +0.0
carbon source Ying_AminoAcid20 rep C; time point 3 -1.0 +0.2 -1.8 -0.1 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 3 -2.3 -0.1 -0.2 -0.0 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -1.9 -0.3 -0.4 +0.1 -0.0
stress Choline Lysine 20 mM -1.2 -0.7 -0.5 +0.0 -0.0
carbon source Ying_Nucleobase14 rep B; time point 1 -0.5 +0.1 -1.7 -0.1 -0.0
carbon source Ying_Nucleobase14 rep C; time point 3 -2.1 +0.0 -0.0 -0.1 -0.2
motility inner cut, LB soft agar motility assay -0.9 -0.3 -1.0 -0.1 -0.0
carbon source Ying_OrganicAcid7 rep B; time point 3 -1.4 -0.1 -0.5 -0.1 -0.1
motility outer cut, LB soft agar motility assay +0.1 -0.7 -1.2 -0.2 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -2.2 -0.1 +0.3 -0.1 +0.1
stress Bile salts 0.0125 M -1.0 -0.2 -0.5 +0.0 -0.3
carbon source Ying_all64 rep C; time point 3 -2.2 -0.1 +0.4 +0.1 -0.0
carbon source Ying_Nucleobase14 rep C; time point 2 -0.8 +0.1 -1.1 -0.1 +0.1
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.4 -0.1 -1.5 +0.1 +0.1
carbon source Ying_Others16 rep C; time point 3 -1.9 +0.0 -0.2 +0.4 +0.0
stress RCH2 defined with Cobalt chloride 0.04 mM -0.8 +0.4 -0.6 -0.3 -0.1
carbon source Ying_Others16 rep A; time point 3 -1.2 +0.1 -0.3 +0.3 -0.2
carbon source Ying_Others16 rep C; time point 2 -1.7 +0.0 +0.4 +0.1 +0.1
nitrogen source L-Aspartic Acid (N) +0.4 +0.1 -1.5 -0.1 -0.0
stress Cobalt chloride 0.4 mM -1.3 +0.1 +1.3 -0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 2 +1.2 -0.2 -0.9 +0.1 +0.1
stress Hydroxylamine 0.5 M +0.9 -0.4 +0.4 +0.1 -0.3
vitamin With vitamins t2 -0.4 -0.4 +1.6 +0.3 -0.1
stress Zinc chloride 0.0000015625 M +1.1 -0.1 +1.1 +0.0 +0.0
vitamin No vitamins t2 +0.1 +0.1 +2.0 +0.3 +0.1
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