Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_5994 and Pf6N2E2_5995 are separated by 389 nucleotidesPf6N2E2_5995 and Pf6N2E2_5996 are separated by 9 nucleotidesPf6N2E2_5996 and Pf6N2E2_5997 overlap by 4 nucleotidesPf6N2E2_5997 and Pf6N2E2_5998 are separated by 128 nucleotides Pf6N2E2_5994 - Superfamily II DNA/RNA helicases, SNF2 family, at 6,810,094 to 6,810,435 _5994 Pf6N2E2_5995 - Protein containing domains DUF404, DUF407, at 6,810,825 to 6,812,234 _5995 Pf6N2E2_5996 - Protein containing domains DUF403, at 6,812,244 to 6,813,194 _5996 Pf6N2E2_5997 - Protein containing transglutaminase-like domain, putative cysteine protease, at 6,813,191 to 6,813,994 _5997 Pf6N2E2_5998 - Cytochrome c family protein, at 6,814,123 to 6,814,935 _5998
Group Condition Pf6N2E2_5994 Pf6N2E2_5995 Pf6N2E2_5996 Pf6N2E2_5997 Pf6N2E2_5998
stress periodate 0.00125 M -0.7 +0.1 -0.1 -0.3 -0.2
stress RCH2 defined with Cobalt chloride 0.04 mM -1.3 +0.1 +0.0 +0.1 -0.1
stress Cobalt chloride 0.4 mM -0.6 +0.1 -0.1 -0.2 -0.2
stress copper (II) chloride 3 mM -0.5 +0.1 -0.1 -0.3 -0.1
nitrogen source L-Serine (N) -0.4 -0.1 -0.3 -0.3 +0.2
carbon source D-Alanine (C) -0.8 +0.0 +0.0 -0.2 +0.1
lb LB no stress 48 hours -0.3 +0.1 -0.2 -0.4 -0.0
motility inner cut, LB soft agar motility assay -0.6 -0.3 +0.0 -0.1 +0.1
stress RCH2 defined with Cobalt chloride 0.04 mM -0.6 +0.1 +0.3 -0.2 -0.3
stress Cobalt chloride 0.6 mM -0.7 +0.1 -0.1 +0.1 -0.2
carbon source Carbon source Sucrose 5 mM -0.4 -0.1 +0.2 -0.3 -0.2
carbon source D-Galactose (C) -0.6 +0.1 +0.1 -0.4 +0.1
stress Vancomycin 0.24 mg/ml -0.1 -0.2 -0.1 -0.4 +0.2
carbon source L-Arabinose (C) -0.7 -0.1 -0.1 -0.0 +0.3
carbon source D-Glucosamine Hydrochloride (C) -0.9 +0.1 +0.0 +0.0 +0.1
stress Cobalt chloride 0.4 mM -0.6 +0.2 -0.1 -0.1 -0.1
stress Hydroxylamine 0.5 M -0.2 +0.1 +0.2 -0.2 -0.3
carbon source Ying_Others16 rep C; time point 3 -0.4 -0.2 +0.1 -0.0 +0.2
carbon source D-Mannose (C) -0.2 -0.1 -0.2 -0.3 +0.3
carbon source D-Xylose (C) -0.5 +0.2 +0.2 -0.3 +0.1
stress Zinc chloride 0.0000015625 M +0.2 +0.2 -0.3 -0.4 +0.0
carbon source octanoate (C) -0.6 +0.2 -0.3 +0.1 +0.5
stress Cobalt chloride 0.6 mM -0.5 +0.1 -0.1 +0.1 +0.2
nitrogen source Glucuronamide (N) +0.2 +0.2 +0.4 -0.1 -0.5
nitrogen source nitrogen source nitrate 5mM -0.4 +0.2 +0.2 +0.0 +0.2
stress thiosulfate 0.25 M +0.9 -0.1 -0.1 -0.2 -0.0
stress Chloride 600 mM +0.3 +0.1 -0.3 +0.2 +0.1
vitamin With vitamins t1 -0.2 -0.1 +0.2 +0.4 +0.2
stress Nickel (II) chloride 0.0025 M +0.4 -0.0 +0.3 -0.2 +0.1
vitamin No vitamins t1 +0.0 -0.1 +0.4 +0.4 +0.1
remove
Pf6N2E2_5994
plot
remove
Pf6N2E2_5995
plot
remove
Pf6N2E2_5996
remove
Pf6N2E2_5997
plot
remove
Pf6N2E2_5998
plot