Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_583 and Pf6N2E2_584 are separated by 4 nucleotidesPf6N2E2_584 and Pf6N2E2_585 overlap by 4 nucleotidesPf6N2E2_585 and Pf6N2E2_586 are separated by 267 nucleotidesPf6N2E2_586 and Pf6N2E2_587 are separated by 147 nucleotides Pf6N2E2_583 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 658,464 to 659,537 _583 Pf6N2E2_584 - ABC transporter, periplasmic substrate-binding protein, at 659,542 to 661,395 _584 Pf6N2E2_585 - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1), at 661,392 to 663,206 _585 Pf6N2E2_586 - Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-), at 663,474 to 664,874 _586 Pf6N2E2_587 - Hydroxyacylglutathione hydrolase (EC 3.1.2.6), at 665,022 to 665,789 _587
Group Condition Pf6N2E2_583 Pf6N2E2_584 Pf6N2E2_585 Pf6N2E2_586 Pf6N2E2_587
motility inner cut, LB soft agar motility assay -1.1 -1.7 -0.5 -2.2 -0.7
motility inner cut, LB soft agar motility assay -1.8 -2.0 -0.1 -1.5 -0.5
motility inner cut, LB soft agar motility assay -1.7 -2.0 -0.5 -1.3 -0.3
stress Vancomycin 0.24 mg/ml -1.0 -0.8 -0.2 -2.9 -0.3
stress Choline Lysine 20 mM -0.8 -0.9 -0.1 -2.7 -0.5
motility outer cut, LB soft agar motility assay -1.6 -1.4 -0.1 -0.9 -0.3
motility outer cut, LB soft agar motility assay -1.8 -1.3 +0.0 -0.9 -0.3
stress Bile salts 0.0125 M -1.0 -0.4 -0.4 -1.3 -1.0
stress Fusidic 0.4 mg/ml +0.1 -0.4 +0.0 -2.0 -0.4
stress deoxycholate 0.0125 M -0.0 -0.8 -0.6 -1.0 -0.2
stress L-Lysine 25 mM -0.2 -0.1 -0.1 -2.0 -0.2
stress Vancomycin 0.12 mg/ml -0.4 -0.3 -0.0 -1.5 -0.3
carbon source propionate (C) -0.3 -0.2 -0.4 -1.2 -0.3
nitrogen source nitrogen source nitrite 0.5mM -0.4 -0.2 -0.3 -0.8 -0.7
stress Zinc chloride 0.0000015625 M +0.3 -0.0 -0.2 -2.4 -0.0
carbon source propionate (C) -0.4 -0.4 +0.0 -1.1 -0.2
stress Sisomicin 0.0008 mg/ml -0.2 -0.4 -0.2 -1.0 -0.3
stress Sisomicin 0.0016 mg/ml -0.2 -0.4 +0.0 -1.0 -0.5
nitrogen source nitrogen source nitrate 5mM -0.2 -0.3 -0.1 -0.7 -0.7
stress antimonate 0.005 M +0.0 +0.1 -0.2 -0.4 -1.3
carbon source D-Galactose (C) -0.4 -0.9 +0.2 +0.8 +0.1
carbon source D-Galactose (C) -0.6 -0.5 -0.1 +1.0 +0.3
stress sodium iodate 0.005 M +0.4 +0.4 +0.1 +1.0 -0.5
stress Chloramphenicol 0.008 mg/ml +0.2 +0.2 -0.0 +1.1 +0.5
stress DEANONOate 0.000625 M +0.7 +0.7 +0.3 +0.7 -0.3
carbon source D-Fructose (C) +0.9 +0.5 +0.1 +0.8 -0.2
stress periodate 0.00125 M +0.4 +0.3 +0.2 +1.0 +0.2
carbon source D-Glucosamine Hydrochloride (C) +0.7 +0.5 +0.4 +0.4 +0.2
stress Lomefloxacin 0.0002 mM +0.3 +0.3 +0.2 +1.2 +0.4
carbon source m-Inositol (C) +0.9 +1.0 +0.0 +0.5 +0.4
remove
Pf6N2E2_583
plot		 remove
Pf6N2E2_584
plot		 remove
Pf6N2E2_585		 remove
Pf6N2E2_586
plot		 remove
Pf6N2E2_587
plot