Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_582 and Pf6N2E2_583 are separated by 1 nucleotidesPf6N2E2_583 and Pf6N2E2_584 are separated by 4 nucleotidesPf6N2E2_584 and Pf6N2E2_585 overlap by 4 nucleotidesPf6N2E2_585 and Pf6N2E2_586 are separated by 267 nucleotides Pf6N2E2_582 - Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1), at 657,443 to 658,462 _582 Pf6N2E2_583 - Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1), at 658,464 to 659,537 _583 Pf6N2E2_584 - ABC transporter, periplasmic substrate-binding protein, at 659,542 to 661,395 _584 Pf6N2E2_585 - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1), at 661,392 to 663,206 _585 Pf6N2E2_586 - Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-), at 663,474 to 664,874 _586
Group Condition Pf6N2E2_582 Pf6N2E2_583 Pf6N2E2_584 Pf6N2E2_585 Pf6N2E2_586
motility inner cut, LB soft agar motility assay -2.2 -1.8 -2.0 -0.1 -1.5
motility inner cut, LB soft agar motility assay -2.0 -1.1 -1.7 -0.5 -2.2
motility inner cut, LB soft agar motility assay -1.8 -1.7 -2.0 -0.5 -1.3
stress Vancomycin 0.24 mg/ml -1.0 -1.0 -0.8 -0.2 -2.9
motility outer cut, LB soft agar motility assay -1.8 -1.8 -1.3 +0.0 -0.9
motility outer cut, LB soft agar motility assay -1.6 -1.6 -1.4 -0.1 -0.9
stress Choline Lysine 20 mM -1.2 -0.8 -0.9 -0.1 -2.7
stress Bile salts 0.0125 M -0.6 -1.0 -0.4 -0.4 -1.3
stress deoxycholate 0.0125 M -0.8 -0.0 -0.8 -0.6 -1.0
carbon source propionate (C) -0.8 -0.4 -0.4 +0.0 -1.1
stress L-Lysine 25 mM -0.4 -0.2 -0.1 -0.1 -2.0
carbon source propionate (C) -0.4 -0.3 -0.2 -0.4 -1.2
stress Vancomycin 0.12 mg/ml -0.4 -0.4 -0.3 -0.0 -1.5
stress Zinc chloride 0.0000015625 M -0.2 +0.3 -0.0 -0.2 -2.4
stress Fusidic 0.4 mg/ml +0.0 +0.1 -0.4 +0.0 -2.0
stress Sisomicin 0.0008 mg/ml -0.5 -0.2 -0.4 -0.2 -1.0
stress 4-Hydroxyacetophenone 0.00025 M -0.7 -0.3 -0.7 +0.1 -0.5
stress Cobalt chloride 0.6 mM -0.9 -0.1 +0.2 -0.1 -0.6
carbon source D-Galactose (C) -0.5 -0.4 -0.9 +0.2 +0.8
carbon source D-Galactose (C) -0.4 -0.6 -0.5 -0.1 +1.0
carbon source D-Glucosamine Hydrochloride (C) +0.4 +0.4 +0.6 +0.1 +0.5
stress perchlorate 50 mM +0.4 +0.5 +0.3 +0.2 +0.7
stress Lomefloxacin 0.0002 mM +0.2 +0.3 +0.3 +0.2 +1.2
stress DEANONOate 0.000625 M +0.4 +0.3 +0.5 +0.4 +0.8
carbon source Glycerol (C) +0.7 +0.6 +0.7 +0.2 +0.2
stress sodium iodate 0.005 M +0.6 +0.4 +0.4 +0.1 +1.0
carbon source D-Glucosamine Hydrochloride (C) +0.6 +0.7 +0.5 +0.4 +0.4
carbon source D-Fructose (C) +0.5 +0.9 +0.5 +0.1 +0.8
stress DEANONOate 0.000625 M +0.5 +0.7 +0.7 +0.3 +0.7
carbon source m-Inositol (C) +0.9 +0.9 +1.0 +0.0 +0.5
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