Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5799 and Pf6N2E2_5800 are separated by 131 nucleotidesPf6N2E2_5800 and Pf6N2E2_5801 are separated by 362 nucleotidesPf6N2E2_5801 and Pf6N2E2_5802 are separated by 64 nucleotidesPf6N2E2_5802 and Pf6N2E2_5803 are separated by 147 nucleotides Pf6N2E2_5799 - Patatin, at 6,616,216 to 6,617,370 _5799 Pf6N2E2_5800 - Nucleoside-binding outer membrane protein, at 6,617,502 to 6,618,287 _5800 Pf6N2E2_5801 - FIG137887: membrane protein related to purine degradation, at 6,618,650 to 6,619,945 _5801 Pf6N2E2_5802 - Ureidoglycolate hydrolase (EC 3.5.3.19), at 6,620,010 to 6,620,513 _5802 Pf6N2E2_5803 - Allantoicase (EC 3.5.3.4), at 6,620,661 to 6,621,656 _5803
Group Condition Pf6N2E2_5799 Pf6N2E2_5800 Pf6N2E2_5801 Pf6N2E2_5802 Pf6N2E2_5803
carbon source Ying_Nucleobase14 rep C; time point 3 -0.1 -0.1 -1.2 -2.2 -2.8
carbon source Ying_Nucleobase14 rep B; time point 3 +0.2 -0.0 -1.3 -2.1 -2.8
carbon source Ying_Nucleobase14 rep A; time point 3 +0.0 -0.0 -1.2 -1.8 -2.8
carbon source Ying_Nucleobase14 rep C; time point 2 -0.2 -0.4 -0.4 -1.6 -2.6
carbon source Ying_Nucleobase14 rep A; time point 2 -0.1 -0.2 -0.5 -1.6 -2.6
carbon source Ying_Nucleobase14 rep B; time point 2 -0.1 -0.1 -0.6 -1.4 -2.6
carbon source Ying_Nucleobase14 rep B; time point 1 -0.3 -0.0 -0.3 -1.5 -2.3
carbon source Ying_Nucleobase14 rep C; time point 1 -0.1 -0.1 -0.1 -1.1 -2.1
carbon source Ying_all64 rep B; time point 3 -0.0 +0.0 +0.0 -0.2 -1.7
carbon source Ying_all64 rep A; time point 3 +0.1 -0.1 +0.1 -0.3 -1.8
carbon source Ying_all64 rep C; time point 3 +0.2 +0.0 +0.1 -0.2 -1.6
stress DEANONOate 0.000625 M -0.8 +0.0 -0.3 -0.3 +0.0
stress Phosphomycin 0.004 mg/ml -0.3 -0.2 -0.2 -0.2 -0.3
stress Nickel (II) chloride 0.0025 M -0.8 -0.1 -0.2 -0.2 +0.2
stress Manganese (II) chloride tetrahydrate 0.00078125 M -0.5 -0.1 -0.2 +0.2 -0.3
nitrogen source Parabanic Acid (N) -0.2 -0.2 +0.2 +0.1 -0.5
carbon source Ying_AminoAcid20 rep B; time point 2 -0.4 -0.0 -0.0 -0.5 +0.4
carbon source octanoate (C) -0.3 -0.1 -0.3 -0.2 +0.4
stress nitrate 0.125 M +0.4 +0.0 -0.1 -0.6 -0.2
stress deoxycholate 0.0125 M -0.5 -0.1 +0.2 -0.3 +0.2
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.1 -0.3 +0.1 -0.4 +0.3
stress RCH2 defined with Thallium(I) acetate 0.002 mg/ml +0.4 +0.0 +0.1 -0.2 -0.6
stress Magnesium chloride 0.125 M -0.4 +0.2 +0.2 -0.3 +0.1
nitrogen source Putrescine (N) +0.1 +0.1 +0.2 +0.1 -0.6
stress RCH2 defined with copper (II) chloride 0.03 mM +0.2 -0.3 +0.3 +0.1 -0.4
vitamin With vitamins t2 +0.2 -0.4 +0.2 +0.1 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 +0.6 -0.0 +0.2 -0.3 +0.3
vitamin With vitamins t1 +0.5 -0.1 +0.2 +0.1 +0.4
stress Bile salts 0.0125 M +0.2 +0.2 -0.2 +0.2 +0.6
motility outer cut, LB soft agar motility assay +0.6 +0.1 +0.1 +0.4 +0.2
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Pf6N2E2_5799
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