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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_5734 and Pf6N2E2_5735 are separated by 181 nucleotides
Pf6N2E2_5735 and Pf6N2E2_5736 are separated by 66 nucleotides
Pf6N2E2_5736 and Pf6N2E2_5737 are separated by 449 nucleotides
Pf6N2E2_5737 and Pf6N2E2_5738 are separated by 11 nucleotides
Pf6N2E2_5734 - NLP/P60 family protein, at 6,551,122 to 6,551,655
_5734
Pf6N2E2_5735 - L-sorbosone dehydrogenase, at 6,551,837 to 6,553,147
_5735
Pf6N2E2_5736 - FIG00961250: hypothetical protein, at 6,553,214 to 6,553,798
_5736
Pf6N2E2_5737 - Cob(I)alamin adenosyltransferase (EC 2.5.1.17), at 6,554,248 to 6,554,859
_5737
Pf6N2E2_5738 - Cobyrinic acid A,C-diamide synthase, at 6,554,871 to 6,556,187
_5738
Group
Condition
Pf6N2E2
_5734
Pf6N2E2
_5735
Pf6N2E2
_5736
Pf6N2E2
_5737
Pf6N2E2
_5738
stress
Choline Lysine 20 mM
-3.0
-0.5
-0.4
N.D.
+0.0
resistance
50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine
-1.3
-0.2
-0.3
N.D.
-0.8
stress
dimethyl sulfone 0.25 M
-0.5
-0.2
-0.5
N.D.
-1.0
nitrogen source
nitrogen source nitrite 1mM
-1.6
-0.1
-0.1
N.D.
-0.5
stress
Nickel (II) chloride 0.0025 M
-0.4
-0.1
-0.3
N.D.
-1.3
carbon source
octanoate (C)
+0.3
+0.2
-0.5
N.D.
-2.1
stress
Manganese (II) chloride tetrahydrate 0.00078125 M
-0.2
-0.0
-0.0
N.D.
-1.8
stress
deoxycholate 0.0125 M
-1.2
-0.0
-0.3
N.D.
-0.5
stress
dimethyl sulfone 0.25 M
-0.9
-0.2
+0.5
N.D.
-1.3
stress
Hydroxylamine 0.5 M
-1.0
-0.1
+0.7
N.D.
-1.5
stress
RCH2 defined with Cobalt chloride 0.02 mM
-0.2
-0.1
-0.7
N.D.
-0.9
stress
RCH2 defined with copper (II) chloride 0.03 mM
+0.0
-0.3
-0.6
N.D.
-1.0
carbon source
Ying_OrganicAcid7 rep C; time point 3
-0.6
-0.2
-0.9
N.D.
-0.2
stress
Manganese (II) chloride tetrahydrate 0.00078125 M
-0.2
-0.0
+0.1
N.D.
-1.6
nitrogen source
nitrogen source Ammonium chloride 20mM
-1.2
+0.1
-0.1
N.D.
-0.4
stress
RCH2 defined with copper (II) chloride 0.03 mM
+0.1
-0.1
-0.2
N.D.
-1.3
nitrogen source
L-Glutamine (N)
+0.3
-0.0
-0.0
N.D.
-1.5
nitrogen source
L-Asparagine (N)
+0.2
-0.0
-0.2
N.D.
-1.3
stress
Bile salts 0.0125 M
-0.5
-0.3
+0.4
N.D.
-0.8
stress
DEANONOate 0.000625 M
-0.3
+0.2
-0.8
N.D.
-0.4
stress
phosphite 0.25 M
-0.5
+0.0
+0.4
N.D.
-0.9
nitrogen source
L-Proline (N)
+0.5
+0.1
-0.1
N.D.
-1.6
nitrogen source
L-Histidine (N)
+0.1
+0.2
+0.0
N.D.
-1.4
nitrogen source
nitrogen source nitrite 1mM
-1.2
-0.2
+0.1
N.D.
+0.2
carbon source
octanoate (C)
+0.2
+0.0
+0.2
N.D.
-1.4
nitrogen source
L-Proline (N)
+0.6
+0.2
+0.1
N.D.
-1.7
nitrogen source
nitrogen source nitrite 0.5mM
-1.0
-0.0
-0.2
N.D.
+0.5
nitrogen source
L-Glutamine (N)
+0.4
+0.1
+0.3
N.D.
-1.4
stress
4-Hydroxyacetophenone 0.00025 M
-1.0
+0.0
+0.7
N.D.
-0.3
stress
DEANONOate 0.000625 M
+0.7
+0.1
+0.2
N.D.
-0.7
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