Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Pf6N2E2_5692	Pf6N2E2_5693	Pf6N2E2_5694	Pf6N2E2_5695	Pf6N2E2_5696
motility	inner cut, LB soft agar motility assay	+1.7	-4.3	-4.9	-6.7	-1.6
motility	inner cut, LB soft agar motility assay	+2.8	-3.5	-5.9	-5.9	-1.6
motility	outer cut, LB soft agar motility assay	+1.4	-2.4	-4.9	-6.2	-1.2
motility	inner cut, LB soft agar motility assay	+3.3	-3.8	-4.0	-5.3	-1.7
motility	outer cut, LB soft agar motility assay	+1.4	-2.0	-4.0	-3.8	-0.6
stress	Bile salts 0.0125 M	+0.3	-0.1	+0.8	+0.8	-1.7
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A	-0.5	-1.0	+0.7	+0.9	+0.2
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B	-0.7	-0.6	+0.6	+1.0	+0.5
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B	-0.5	-0.7	+0.8	+1.2	+0.5
vitamin	No vitamins t2	+0.3	-1.3	+1.1	+0.8	+0.3
denitrifying	Nitrate reduction, replicate A	-0.3	-0.7	+1.0	+1.0	+0.3
denitrifying	Nitrate reduction, replicate B	-0.2	-0.4	+0.9	+1.0	+0.5
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C	-0.4	-0.5	+1.3	+1.3	+0.6
carbon source	Ying_OrganicAcid7 rep A; time point 3	+0.0	-0.7	+1.0	+1.5	+0.7
nitrogen source	nitrogen source nitrite 0.5mM	-0.0	-0.3	+1.1	+1.1	+0.6
carbon source	L-Phenylalanine (C)	-0.2	-0.2	+1.1	+1.2	+0.6
carbon source	L-Phenylalanine (C)	+0.0	-0.2	+1.2	+1.1	+0.6
carbon source	Ying_OrganicAcid7 rep C; time point 3	+0.1	-0.8	+1.1	+1.5	+0.7
resistance	10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine	-0.1	-0.1	+1.0	+1.2	+0.8
carbon source	Ying_OrganicAcid7 rep B; time point 3	+0.1	-0.8	+1.1	+1.9	+0.7
carbon source	propionate (C)	+0.1	-0.1	+1.1	+1.1	+0.7
carbon source	4-Hydroxybenzoic Acid (C)	-0.2	+0.2	+1.2	+1.1	+0.8
carbon source	Ying_AminoAcid20 rep B; time point 3	-0.0	-0.6	+1.0	+1.7	+0.9
carbon source	Ying_Others16 rep A; time point 3	-0.1	-0.4	+1.3	+1.9	+0.5
carbon source	4-Hydroxybenzoic Acid (C)	+0.2	+0.1	+1.1	+0.9	+0.7
carbon source	Ying_AminoAcid20 rep A; time point 3	+0.1	-1.0	+1.3	+1.9	+0.9
carbon source	Ying_Others16 rep C; time point 3	-0.1	-0.3	+1.3	+1.8	+0.5
carbon source	Ying_AminoAcid20 rep C; time point 3	+0.1	-0.8	+1.4	+2.3	+0.9
nitrogen source	Cytidine (N)	+0.1	+0.6	+1.3	+1.3	+1.2
nitrogen source	Cytidine (N)	+0.0	+0.7	+1.8	+1.7	+0.7