Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Pf6N2E2_5688	Pf6N2E2_5689	Pf6N2E2_5690	Pf6N2E2_5691	Pf6N2E2_5692
motility	inner cut, LB soft agar motility assay	+0.0	-4.7	N.D.	-5.3	+1.7
motility	outer cut, LB soft agar motility assay	-0.1	-5.0	N.D.	-3.5	+1.4
motility	inner cut, LB soft agar motility assay	+0.4	-4.9	N.D.	-5.1	+2.8
motility	outer cut, LB soft agar motility assay	+0.1	-2.6	N.D.	-4.2	+1.4
motility	inner cut, LB soft agar motility assay	+0.3	-3.1	N.D.	-4.4	+3.3
stress	Vancomycin 0.24 mg/ml	-0.3	-1.0	N.D.	-1.0	-0.0
stress	deoxycholate 0.0125 M	-0.2	-0.9	N.D.	-0.6	-0.5
nitrogen source	nitrogen source nitrate 5mM	-0.2	-1.5	N.D.	+0.4	-0.1
stress	Bile salts 0.0125 M	+0.2	+0.6	N.D.	-0.8	+0.3
carbon source	Ying_OrganicAcid7 rep A; time point 3	-0.3	-0.4	N.D.	+1.0	+0.0
stress	RCH2 defined with Cobalt chloride 0.04 mM	+0.4	-0.5	N.D.	+0.6	+0.2
nitrogen source	nitrogen source nitrate 5mM	-0.5	+0.2	N.D.	+0.7	+0.3
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B	+0.1	+0.5	N.D.	+0.8	-0.7
carbon source	Ying_OrganicAcid7 rep B; time point 3	-0.3	-0.1	N.D.	+1.2	+0.1
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B	-0.2	+0.7	N.D.	+0.8	-0.5
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C	-0.3	+0.6	N.D.	+1.0	-0.4
carbon source	4-Hydroxybenzoic Acid (C)	-0.1	+0.5	N.D.	+0.8	-0.2
carbon source	Ying_Nucleobase14 rep C; time point 2	-0.4	+0.7	N.D.	+0.7	+0.1
denitrifying	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A	-0.1	+0.7	N.D.	+0.8	-0.3
nitrogen source	nitrogen source nitrite 1mM	-0.1	+0.5	N.D.	+0.8	-0.1
carbon source	Ying_Others16 rep C; time point 1	-0.2	+0.4	N.D.	+0.9	+0.1
resistance	50% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine	-0.1	+0.7	N.D.	+0.9	-0.2
stress	Lomefloxacin 0.0002 mM	+0.1	+0.8	N.D.	+0.7	-0.1
carbon source	4-Hydroxybenzoic Acid (C)	-0.1	+0.5	N.D.	+0.9	+0.2
carbon source	propionate (C)	-0.1	+0.4	N.D.	+1.2	+0.1
carbon source	Ying_sugar7 rep C; time point 1	+0.2	+0.7	N.D.	+0.9	-0.1
carbon source	Ying_AminoAcid20 rep C; time point 3	-0.3	+0.1	N.D.	+1.8	+0.1
resistance	10% P. fluorescens FW300-N2C3 spent media from growth in 20 mM putrescine	+0.1	+1.0	N.D.	+0.8	-0.1
nitrogen source	Cytidine (N)	-0.1	+0.6	N.D.	+1.3	+0.0
carbon source	Ying_AminoAcid20 rep A; time point 3	+0.1	+0.3	N.D.	+1.5	+0.1