Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_54 and Pf6N2E2_55 are separated by 28 nucleotidesPf6N2E2_55 and Pf6N2E2_56 are separated by 45 nucleotidesPf6N2E2_56 and Pf6N2E2_57 overlap by 43 nucleotidesPf6N2E2_57 and Pf6N2E2_58 overlap by 6 nucleotides Pf6N2E2_54 - Transcriptional regulator, TetR family, at 94,876 to 95,415 _54 Pf6N2E2_55 - Probable hydrolase, at 95,444 to 96,277 _55 Pf6N2E2_56 - FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein, at 96,323 to 96,772 _56 Pf6N2E2_57 - hypothetical protein, at 96,730 to 96,891 _57 Pf6N2E2_58 - tRNA-dihydrouridine synthase C (EC 1.-.-.-), at 96,886 to 97,845 _58
Group Condition Pf6N2E2_54 Pf6N2E2_55 Pf6N2E2_56 Pf6N2E2_57 Pf6N2E2_58
stress Magnesium chloride 0.125 M -0.6 -0.3 -0.2 N.D. -4.6
stress RCH2 defined with Cobalt chloride 0.04 mM -0.2 -2.6 +0.4 N.D. -3.2
nitrogen source nitrogen source nitrite 5mM -3.0 +0.2 -0.3 N.D. -1.7
stress RCH2 defined with copper (II) chloride 0.03 mM -0.1 -2.7 -0.0 N.D. -1.4
carbon source Carbon source Sucrose 2.5 mM +0.5 -2.3 +0.0 N.D. -1.6
stress DEANONOate 0.000625 M -0.2 -2.2 -0.1 N.D. -0.7
carbon source Carbon source Sucrose 10 mM +0.2 -2.3 +0.1 N.D. -1.0
stress Hydroxylamine 0.5 M -0.8 -1.7 -0.2 N.D. -0.3
stress Cobalt chloride 0.4 mM +0.1 -1.3 -0.5 N.D. -1.0
carbon source Carbon source D,L-Lactate 10 mM -0.2 -1.1 -0.3 N.D. -1.1
carbon source Carbon source Sucrose 5 mM +0.5 -1.5 +0.1 N.D. -1.9
carbon source Carbon source Sucrose 5 mM +0.1 -0.9 -0.4 N.D. -1.4
stress deoxycholate 0.0125 M -0.3 -0.7 -0.0 N.D. -1.7
motility outer cut, LB soft agar motility assay -0.3 -0.2 +0.1 N.D. -2.1
stress selenite 0.0025 M +0.1 -0.3 +0.1 N.D. -2.2
vitamin With vitamins t1 -0.5 -1.7 -0.3 N.D. +0.2
motility inner cut, LB soft agar motility assay -0.7 -0.5 +0.2 N.D. -1.2
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.7 -0.9 -0.2 N.D. -1.4
carbon source Carbon source Sucrose 2.5 mM +0.4 +0.1 -0.2 N.D. -2.0
stress Aluminum chloride 4 mM +0.5 -1.1 +0.0 N.D. -1.2
stress Doxycycline hyclate 0.0001 mg/ml +0.4 -0.5 -0.3 N.D. -1.3
stress Fluorophosphate 0.125 M -0.6 +0.3 +0.2 N.D. -1.5
stress Zinc chloride 0.0000015625 M +0.8 -2.5 -0.2 N.D. +0.5
carbon source L-Leucine (C) +0.7 -0.9 +0.4 N.D. -0.9
carbon source Ying_Nucleobase14 rep B; time point 2 +0.7 -1.0 +0.4 N.D. -0.4
nitrogen source L-Serine (N) +1.1 -0.3 +0.2 N.D. -1.0
nitrogen source D-Alanine (N) +0.4 +0.8 +0.2 N.D. -1.0
carbon source L-Asparagine (C) +0.7 +0.3 +0.5 N.D. -0.9
carbon source D-Galactose (C) +1.2 +0.4 +0.3 N.D. -1.0
carbon source Glycerol (C) +0.7 +1.1 +0.1 N.D. -0.6
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