Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5550 and Pf6N2E2_5551 are separated by 53 nucleotidesPf6N2E2_5551 and Pf6N2E2_5552 are separated by 10 nucleotidesPf6N2E2_5552 and Pf6N2E2_5553 are separated by 476 nucleotidesPf6N2E2_5553 and Pf6N2E2_5554 are separated by 234 nucleotides Pf6N2E2_5550 - Copper resistance protein C precursor, at 6,365,390 to 6,365,776 _5550 Pf6N2E2_5551 - Copper resistance protein B, at 6,365,830 to 6,366,750 _5551 Pf6N2E2_5552 - Multicopper oxidase, at 6,366,761 to 6,368,578 _5552 Pf6N2E2_5553 - Quinolinate synthetase (EC 2.5.1.72), at 6,369,055 to 6,370,113 _5553 Pf6N2E2_5554 - FIG023103: Predicted transmembrane protein, at 6,370,348 to 6,370,836 _5554
Group Condition Pf6N2E2_5550 Pf6N2E2_5551 Pf6N2E2_5552 Pf6N2E2_5553 Pf6N2E2_5554
stress copper (II) chloride 3 mM +1.7 -5.2 -5.1 +1.2 +0.6
carbon source L-Histidine (C) -0.4 -0.1 -0.2 -3.6 -0.5
nitrogen source L-Arginine (N) -0.1 -0.3 +0.0 -4.0 -0.1
nitrogen source L-Arginine (N) -0.3 -0.2 +0.1 -4.0 +0.2
carbon source octanoate (C) -0.1 -0.3 +0.0 -4.2 +1.0
nitrogen source Cytidine (N) -0.9 -0.1 -0.2 -0.1 -2.3
carbon source D-Gluconic Acid (C) +0.0 +0.1 +0.0 -3.7 +0.1
vitamin No vitamins t2 +0.6 -0.2 +0.0 -3.9 -0.1
carbon source L-Histidine (C) -0.4 -0.0 -0.2 -2.5 -0.2
nitrogen source L-Lysine (N) -0.8 -0.2 +0.1 -2.6 +0.2
carbon source Putrescine (C) -0.3 -0.2 -0.3 -0.7 -1.7
carbon source Tween 20 (C) -0.1 +0.5 +0.4 -4.2 +0.3
nitrogen source L-Lysine (N) +0.0 +0.1 +0.0 -2.8 -0.6
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B +0.2 +0.0 +0.2 -3.0 -0.5
carbon source octanoate (C) +0.0 +0.2 -0.2 -4.2 +1.1
carbon source L-Arabinose (C) -0.3 +0.1 +0.0 -2.5 -0.1
carbon source Ying_OrganicAcid7 rep A; time point 2 -0.9 +0.2 +0.0 -1.4 -0.5
vitamin No vitamins t1 +0.2 -0.2 +0.0 -2.7 +0.5
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A -0.2 +0.3 +0.1 -2.7 +0.3
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C +0.2 +0.0 +0.1 -2.6 +0.2
carbon source Tween 20 (C) -0.1 +0.3 +0.3 -2.5 +0.1
carbon source D-Alanine (C) +0.1 -0.7 +0.2 -1.8 +0.8
carbon source L-Alanine (C) -0.2 -0.3 +0.1 -1.7 +0.8
carbon source m-Inositol (C) +0.1 +0.6 +0.3 -2.9 +1.3
carbon source Glycerol (C) -0.1 +0.7 +0.5 -1.0 +1.0
carbon source Glycerol (C) -0.2 +0.7 +0.5 -1.1 +1.3
carbon source D-Galactose (C) -0.1 +0.2 +0.7 -1.7 +3.4
carbon source D-Galactose (C) +0.1 +0.4 +0.6 -1.5 +3.0
carbon source D-Fructose (C) -0.2 +0.7 +0.5 +2.8 +0.9
stress Hydroxylamine 0.5 M +0.8 -0.1 +0.1 +0.5 +3.6
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