Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_6157 and Pf6N2E2_5547 are separated by 152 nucleotidesPf6N2E2_5547 and Pf6N2E2_5548 are separated by 97 nucleotidesPf6N2E2_5548 and Pf6N2E2_5549 are separated by 255 nucleotidesPf6N2E2_5549 and Pf6N2E2_5550 are separated by 4 nucleotides Pf6N2E2_6157 - tRNA-Lys-TTT, at 6,361,278 to 6,361,350 _6157 Pf6N2E2_5547 - hypothetical protein, at 6,361,503 to 6,362,933 _5547 Pf6N2E2_5548 - Cyanate transport protein CynX, at 6,363,031 to 6,364,218 _5548 Pf6N2E2_5549 - Copper resistance protein D, at 6,364,474 to 6,365,385 _5549 Pf6N2E2_5550 - Copper resistance protein C precursor, at 6,365,390 to 6,365,776 _5550
Group Condition Pf6N2E2_6157 Pf6N2E2_5547 Pf6N2E2_5548 Pf6N2E2_5549 Pf6N2E2_5550
carbon source Ying_Nucleobase14 rep A; time point 2 N.D. -0.1 +0.0 -0.3 -1.1
carbon source D-Trehalose (C) N.D. +0.0 +0.0 -0.1 -1.2
carbon source Ying_OrganicAcid7 rep A; time point 2 N.D. +0.1 -0.1 -0.2 -0.9
nitrogen source L-Lysine (N) N.D. +0.1 -0.0 -0.3 -0.8
carbon source Ying_Others16 rep C; time point 2 N.D. -0.1 +0.2 +0.2 -1.2
stress Chloride 0.5 M N.D. -0.1 +0.2 -0.2 -0.6
nitrogen source Cytidine (N) N.D. +0.2 -0.1 +0.2 -0.9
carbon source Ying_Others16 rep B; time point 2 N.D. +0.1 +0.3 -0.0 -0.9
carbon source L-Leucine (C) N.D. +0.2 +0.1 -0.2 -0.6
carbon source Ying_OrganicAcid7 rep C; time point 2 N.D. +0.0 +0.1 +0.2 -0.7
nitrogen source Glucuronamide (N) N.D. +0.2 -0.2 +0.3 -0.5
stress deoxycholate 0.0125 M N.D. +0.0 +0.2 +0.3 -0.6
stress Hydroxylamine 0.5 M N.D. -0.4 -0.2 -0.3 +0.8
stress RCH2 defined with copper (II) chloride 0.03 mM N.D. -0.1 -0.1 -0.3 +0.7
stress Manganese (II) chloride tetrahydrate 0.00078125 M N.D. +0.2 +0.3 +0.2 -0.5
stress Manganese (II) chloride tetrahydrate 0.00078125 M N.D. +0.2 +0.4 +0.2 -0.5
motility inner cut, LB soft agar motility assay N.D. +0.3 +0.2 +0.3 -0.4
stress Nickel (II) chloride 1 mM N.D. +0.2 -0.3 +0.1 +0.5
nitrogen source nitrogen source nitrate 20mM N.D. +0.1 +0.2 -0.3 +0.6
nitrogen source nitrogen source nitrate 5mM N.D. +0.4 -0.0 -0.3 +0.6
stress Zinc chloride 0.0000015625 M N.D. +0.1 +0.4 +0.4 -0.3
stress Hydroxide 0.05 M N.D. +0.3 +0.3 -0.3 +0.4
vitamin No vitamins t2 N.D. +0.1 -0.2 +0.4 +0.6
lb LB no stress 48 hours N.D. -0.1 +0.4 +0.1 +0.6
nitrogen source nitrogen source nitrate 5mM N.D. +0.3 +0.2 +0.1 +0.5
stress Chloride 0.5 M N.D. +0.2 +0.3 +0.5 +0.0
nitrogen source nitrogen source nitrite 5mM N.D. +0.4 +0.4 +0.1 +0.2
stress Bile salts 0.0125 M N.D. +0.1 +0.4 -0.1 +0.8
nitrogen source nitrogen source nitrite 5mM N.D. +0.3 +0.5 +0.1 +0.7
stress copper (II) chloride 3 mM N.D. +0.1 +0.5 +2.3 +1.7
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