Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_543 and Pf6N2E2_544 are separated by 153 nucleotidesPf6N2E2_544 and Pf6N2E2_545 are separated by 24 nucleotidesPf6N2E2_545 and Pf6N2E2_546 are separated by 198 nucleotidesPf6N2E2_546 and Pf6N2E2_547 are separated by 221 nucleotides Pf6N2E2_543 - Myo-inositol 2-dehydrogenase (EC 1.1.1.18), at 612,214 to 613,329 _543 Pf6N2E2_544 - Short-chain dehydrogenase/reductase SDR, at 613,483 to 614,250 _544 Pf6N2E2_545 - Predicted aminoglycoside phosphotransferase, at 614,275 to 615,342 _545 Pf6N2E2_546 - FIG00966904: hypothetical protein, at 615,541 to 615,936 _546 Pf6N2E2_547 - Phophatidylinositol-4-phosphate 5-kinase (EC 2.7.1.68), at 616,158 to 616,700 _547
Group Condition Pf6N2E2_543 Pf6N2E2_544 Pf6N2E2_545 Pf6N2E2_546 Pf6N2E2_547
carbon source D-Glucose (C) -0.2 -0.1 -0.1 -1.5 -0.7
stress bromate 0.05 M +0.0 +0.6 -0.1 -2.1 -0.8
stress sodium iodate 0.005 M +0.2 -0.7 +0.1 -1.8 -0.1
carbon source Carbon source Sucrose 5 mM -0.0 -1.2 -0.2 -0.7 -0.2
stress Vanillyl Alcohol 0.005 M -0.0 -0.6 -0.1 -0.3 -1.0
nitrogen source L-Serine (N) -0.5 -1.2 -0.1 +0.9 -1.1
nitrogen source L-Aspartic Acid (N) +0.1 -0.3 -0.1 -0.8 -0.9
stress Hydroxylamine 0.5 M +0.0 -1.8 -0.1 -0.3 +0.4
lb LB no stress 24 hours +0.2 -0.0 -0.0 -1.8 -0.1
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B -0.1 +0.6 +0.0 -1.9 -0.3
stress sodium iodate 0.005 M +0.4 +0.7 +0.0 -2.9 +0.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C -0.2 +0.3 -0.0 -1.2 -0.3
nitrogen source nitrogen source nitrite 5mM +0.2 -0.7 +0.2 -0.5 -0.5
stress Bile salts 0.0125 M -0.9 +0.2 -0.1 +0.3 -0.9
stress Fluorophosphate 0.125 M +0.0 +0.4 +0.0 -1.4 -0.4
nitrogen source L-Histidine (N) -0.1 -0.8 -0.1 +1.0 -0.7
carbon source D-Sorbitol (C) -0.0 -0.9 +0.0 +0.9 -0.2
nitrogen source L-Serine (N) -0.1 +0.3 -0.1 +0.9 -1.1
nitrogen source L-Glutamic (N) +0.1 -0.5 +0.1 +1.2 -0.6
nitrogen source Glucuronamide (N) -0.1 -1.0 +0.2 +1.0 +0.2
carbon source L-Leucine (C) -0.1 -0.8 +0.0 +1.1 +0.1
vitamin No vitamins t1 -0.0 +0.9 +0.1 -0.8 +0.3
carbon source propionate (C) -0.4 -0.3 +0.3 +1.2 -0.1
nitrogen source L-Glutamine (N) -0.3 -0.1 -0.2 +1.2 +0.3
motility inner cut, LB soft agar motility assay +0.2 +0.1 +0.0 +1.6 -0.5
stress RCH2 defined with Nickel (II) chloride 0.04 mM +0.0 -0.4 +0.1 +0.7 +1.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.3 +1.0 -0.0 +0.4 +0.5
carbon source Carbon source D-Glucose 10 mM -0.0 -0.3 -0.0 +1.8 +0.4
stress deoxycholate 0.0125 M +0.1 +0.8 -0.3 +1.8 -0.0
stress RCH2 defined with copper (II) chloride 0.03 mM -0.2 +0.6 +0.1 +1.3 +0.9
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