Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5336 and Pf6N2E2_5337 are separated by 256 nucleotidesPf6N2E2_5337 and Pf6N2E2_5338 overlap by 1 nucleotidesPf6N2E2_5338 and Pf6N2E2_5339 overlap by 1 nucleotidesPf6N2E2_5339 and Pf6N2E2_5340 are separated by 148 nucleotides Pf6N2E2_5336 - SSU ribosomal protein S9p (S16e), at 6,131,409 to 6,131,801 _5336 Pf6N2E2_5337 - Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2), at 6,132,058 to 6,132,651 _5337 Pf6N2E2_5338 - Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2), at 6,132,651 to 6,133,862 _5338 Pf6N2E2_5339 - ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit, at 6,133,862 to 6,134,644 _5339 Pf6N2E2_5340 - Stringent starvation protein A, at 6,134,793 to 6,135,410 _5340
Group Condition Pf6N2E2_5336 Pf6N2E2_5337 Pf6N2E2_5338 Pf6N2E2_5339 Pf6N2E2_5340
carbon source Ying_AminoAcid20 rep C; time point 3 N.D. -6.9 -7.0 -7.9 -1.2
carbon source Ying_AminoAcid20 rep A; time point 3 N.D. -5.7 -6.2 -6.4 -1.4
motility outer cut, LB soft agar motility assay N.D. -4.5 -5.5 -4.2 -4.8
carbon source Ying_AminoAcid20 rep B; time point 3 N.D. -4.8 -5.3 -5.5 -1.1
motility inner cut, LB soft agar motility assay N.D. -3.2 -4.4 -4.2 -4.8
motility inner cut, LB soft agar motility assay N.D. -4.6 -3.9 -3.3 -3.8
motility outer cut, LB soft agar motility assay N.D. -4.1 -4.1 -4.1 -3.1
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -5.0 -4.8 -5.0 -0.4
motility inner cut, LB soft agar motility assay N.D. -3.9 -4.7 -3.2 -3.4
nitrogen source nitrogen source nitrite 5mM N.D. -4.5 -4.4 -4.4 -1.2
nitrogen source nitrogen source nitrite 5mM N.D. -4.5 -4.6 -4.5 -0.8
vitamin No vitamins t2 N.D. -4.6 -4.6 -4.6 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM N.D. -4.5 -4.4 -4.4 -0.2
nitrogen source nitrogen source nitrite 1mM N.D. -4.0 -4.0 -4.1 -0.4
nitrogen source nitrogen source nitrite 1mM N.D. -3.9 -4.0 -4.1 -0.4
nitrogen source nitrogen source nitrate 20mM N.D. -3.9 -3.8 -4.0 -0.6
nitrogen source nitrogen source nitrite 0.5mM N.D. -3.7 -3.8 -3.7 -0.3
nitrogen source nitrogen source nitrite 0.5mM N.D. -3.5 -3.6 -4.0 -0.0
carbon source Putrescine (C) N.D. -3.9 -3.5 -3.9 +0.7
nitrogen source nitrogen source nitrate 5mM N.D. -3.4 -3.3 -3.2 -0.4
vitamin With vitamins t2 N.D. -3.4 -3.6 -3.5 +0.1
nitrogen source Putrescine (N) N.D. -3.3 -3.0 -3.7 +0.4
carbon source Ying_Others16 rep C; time point 3 N.D. -3.2 -3.4 -3.1 +0.8
carbon source Ying_Others16 rep A; time point 3 N.D. -3.1 -3.3 -3.2 +0.7
carbon source Ying_Others16 rep B; time point 3 N.D. -3.2 -3.3 -3.1 +0.9
stress DEANONOate 0.000625 M N.D. +3.6 +3.1 +3.2 -2.1
stress DEANONOate 0.000625 M N.D. +3.6 +3.5 +3.9 -1.0
carbon source D-Galactose (C) N.D. +3.9 +3.8 +3.6 +1.3
carbon source D-Galactose (C) N.D. +4.6 +4.6 +4.4 +1.5
carbon source D-Fructose (C) N.D. +5.8 +5.7 +5.4 +0.4
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