Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5329 and Pf6N2E2_5330 are separated by 24 nucleotidesPf6N2E2_5330 and Pf6N2E2_5331 are separated by 101 nucleotidesPf6N2E2_5331 and Pf6N2E2_5332 are separated by 112 nucleotidesPf6N2E2_5332 and Pf6N2E2_5333 are separated by 151 nucleotides Pf6N2E2_5329 - Alpha/beta hydrolase, at 6,123,947 to 6,124,582 _5329 Pf6N2E2_5330 - Tryptophanyl-tRNA synthetase (EC 6.1.1.2), at 6,124,607 to 6,125,962 _5330 Pf6N2E2_5331 - ATPase, AFG1 family, at 6,126,064 to 6,127,158 _5331 Pf6N2E2_5332 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 6,127,271 to 6,128,260 _5332 Pf6N2E2_5333 - Butyryl-CoA dehydrogenase (EC 1.3.99.2), at 6,128,412 to 6,129,548 _5333
Group Condition Pf6N2E2_5329 Pf6N2E2_5330 Pf6N2E2_5331 Pf6N2E2_5332 Pf6N2E2_5333
stress Hydroxylamine 0.5 M +0.0 N.D. -2.8 -0.2 -0.5
carbon source Trisodium citrate (C) -0.7 N.D. -2.4 -0.2 +0.0
stress DEANONOate 0.000625 M -0.0 N.D. -3.0 +0.0 -0.2
carbon source Trisodium citrate (C) -0.5 N.D. -2.4 -0.2 +0.0
motility outer cut, LB soft agar motility assay -0.1 N.D. -3.3 +0.3 +0.1
carbon source succinate (C) -0.0 N.D. -2.9 +0.0 -0.1
stress 5-Hydroxymethylfurfural 10 mM +0.2 N.D. -2.9 -0.0 -0.1
motility inner cut, LB soft agar motility assay -0.0 N.D. -2.7 +0.2 +0.1
nitrogen source nitrogen source nitrite 5mM -0.6 N.D. -1.5 -0.3 +0.2
motility inner cut, LB soft agar motility assay +0.5 N.D. -2.6 +0.0 -0.1
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. -2.2 -0.0 +0.3
nitrogen source nitrogen source nitrite 5mM -0.4 N.D. -1.6 -0.4 +0.2
stress DEANONOate 0.000625 M +0.1 N.D. -2.5 +0.1 +0.1
nitrogen source L-Isoleucine (N) +0.4 N.D. -2.4 -0.1 +0.1
nitrogen source nitrogen source nitrate 5mM -0.8 N.D. -1.3 -0.1 +0.2
carbon source succinate (C) -0.2 N.D. -2.1 +0.0 +0.3
stress Vancomycin 0.24 mg/ml -0.0 N.D. -2.0 -0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.4 N.D. -2.4 +0.1 +0.2
stress Phosphomycin 0.004 mg/ml +0.6 N.D. -1.8 +0.2 -0.6
carbon source D-Alanine (C) +0.8 N.D. -2.0 -0.1 -0.0
stress Cobalt chloride 0.4 mM +0.7 N.D. -1.4 -0.2 +0.2
nitrogen source L-Isoleucine (N) +1.0 N.D. -1.7 +0.1 -0.1
stress Cobalt chloride 0.6 mM +0.9 N.D. -1.4 +0.2 -0.1
stress RCH2 defined with Nickel (II) chloride 0.04 mM -0.3 N.D. +1.0 -0.4 +0.7
carbon source L-Alanine (C) +1.2 N.D. +0.7 -0.3 +0.8
carbon source m-Inositol (C) +0.3 N.D. +2.1 -0.1 +0.3
carbon source D-Fructose (C) +0.7 N.D. +2.2 +0.0 -0.1
stress Fusidic 0.4 mg/ml +0.9 N.D. +2.0 +0.2 +0.0
carbon source D-Galactose (C) +1.5 N.D. +2.9 +0.1 +0.1
carbon source D-Galactose (C) +1.8 N.D. +3.4 +0.2 -0.2
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