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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf6N2E2_5257 and Pf6N2E2_5258 are separated by 9 nucleotides
Pf6N2E2_5258 and Pf6N2E2_5259 are separated by 132 nucleotides
Pf6N2E2_5259 and Pf6N2E2_5260 are separated by 0 nucleotides
Pf6N2E2_5260 and Pf6N2E2_5261 are separated by 55 nucleotides
Pf6N2E2_5257 - Sulfate adenylyltransferase subunit 2 (EC 2.7.7.4), at 6,051,166 to 6,052,083
_5257
Pf6N2E2_5258 - Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) / Adenylylsulfate kinase (EC 2.7.1.25), at 6,052,093 to 6,053,991
_5258
Pf6N2E2_5259 - FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 6,054,124 to 6,055,032
_5259
Pf6N2E2_5260 - Phosphate acetyltransferase (EC 2.3.1.8), at 6,055,033 to 6,057,132
_5260
Pf6N2E2_5261 - FIG00956983: hypothetical protein, at 6,057,188 to 6,057,358
_5261
Group
Condition
Pf6N2E2
_5257
Pf6N2E2
_5258
Pf6N2E2
_5259
Pf6N2E2
_5260
Pf6N2E2
_5261
nitrogen source
L-Glutamic (N)
-3.9
-4.3
-0.0
-0.2
-1.0
nitrogen source
L-Glutamine (N)
-3.4
-5.2
+0.0
+0.2
-0.9
carbon source
propionate (C)
-2.8
-4.3
-0.3
-0.4
-1.3
nitrogen source
L-Glutamine (N)
-3.8
-5.5
+0.1
-0.1
+0.5
nitrogen source
L-Asparagine (N)
-3.2
-4.2
-0.0
-0.1
-0.8
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate B
-3.2
-5.3
-0.2
+0.1
+0.6
nitrogen source
L-Aspartic Acid (N)
-3.5
-4.3
-0.1
-0.1
+0.6
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B
-3.2
-4.1
-0.1
+0.1
+0.1
nitrogen source
L-Glutamic (N)
-3.1
-3.9
-0.3
-0.0
+0.0
carbon source
propionate (C)
-2.8
-3.2
-0.2
-0.2
-0.9
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C
-2.5
-3.7
-0.2
+0.2
-0.9
stress
RCH2 defined with Cobalt chloride 0.04 mM
-2.9
-4.4
+0.1
-0.5
+0.9
stress
RCH2 defined with Cobalt chloride 0.04 mM
-2.9
-3.3
+0.2
-0.8
+0.2
denitrifying
Nitrate reduction, replicate C
-2.2
-3.5
-0.0
-0.1
-0.7
anaerobic
N1B4wt with N2E2m denitrifying replicate B
-2.6
-3.3
-0.3
-0.2
-0.2
nitrogen source
nitrogen source nitrite 5mM
-2.2
-3.5
-0.3
-0.4
-0.0
nitrogen source
L-Arginine (N)
-3.6
-2.4
-0.5
-0.2
+0.4
nitrogen source
L-Phenylalanine (N)
-2.5
-3.1
-0.4
+0.1
-0.2
nitrogen source
L-Aspartic Acid (N)
-2.6
-3.5
+0.1
-0.3
+0.3
nitrogen source
L-Asparagine (N)
-2.8
-2.9
-0.3
-0.0
+0.2
vitamin
With vitamins t2
-2.7
-3.5
+0.0
-0.1
+0.6
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
-2.5
-4.0
-0.0
+0.2
+0.8
nitrogen source
nitrogen source nitrite 5mM
-2.5
-3.3
-0.2
+0.0
+0.5
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A
-1.9
-3.6
-0.1
+0.1
+0.3
vitamin
No vitamins t2
-2.4
-2.5
+0.3
+0.1
+1.3
carbon source
m-Inositol (C)
+2.9
+2.8
-0.3
-0.1
-1.4
stress
Fluorophosphate 0.125 M
+3.8
+3.9
-0.3
+0.1
-2.7
carbon source
D-Fructose (C)
+3.4
+3.4
-0.2
-0.4
-0.5
carbon source
D-Galactose (C)
+5.8
+5.9
-0.3
-0.7
-1.5
carbon source
D-Galactose (C)
+5.2
+5.1
-0.1
-0.5
-0.4
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