Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5161 and Pf6N2E2_5162 overlap by 1 nucleotidesPf6N2E2_5162 and Pf6N2E2_5163 overlap by 45 nucleotidesPf6N2E2_5163 and Pf6N2E2_5164 are separated by 191 nucleotidesPf6N2E2_5164 and Pf6N2E2_5165 overlap by 4 nucleotides Pf6N2E2_5161 - Valine--pyruvate aminotransferase (EC 2.6.1.66) ## AvtA, at 5,950,286 to 5,951,458 _5161 Pf6N2E2_5162 - Sugar/maltose fermentation stimulation protein homolog, at 5,951,458 to 5,952,204 _5162 Pf6N2E2_5163 - Iron-sulfur cluster-binding protein, Rieske family, at 5,952,160 to 5,952,477 _5163 Pf6N2E2_5164 - Periplasmic hemin-binding protein, at 5,952,669 to 5,953,547 _5164 Pf6N2E2_5165 - Hemin ABC transporter, permease protein, at 5,953,544 to 5,954,581 _5165
Group Condition Pf6N2E2_5161 Pf6N2E2_5162 Pf6N2E2_5163 Pf6N2E2_5164 Pf6N2E2_5165
nitrogen source L-Serine (N) -0.3 +0.1 -0.4 -0.4 -0.4
stress Vancomycin 0.12 mg/ml -0.1 -0.1 -0.2 -0.5 -0.2
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 -0.1 -0.3 -0.1 -0.6
carbon source Ying_Nucleobase14 rep A; time point 2 +0.1 -0.4 -0.3 -0.1 -0.1
stress nitrate 0.125 M +0.0 -0.0 -0.3 -0.5 +0.2
carbon source Ying_AminoAcid20 rep A; time point 2 +0.0 +0.1 -0.0 +0.2 -0.7
carbon source propionate (C) +0.0 +0.2 +0.2 -0.5 -0.3
stress copper (II) chloride 3 mM +0.1 -0.2 -0.5 +0.3 +0.1
nitrogen source L-Arginine (N) -0.2 -0.1 +0.3 -0.3 +0.2
stress bromate 0.05 M +0.1 +0.2 -0.4 -0.2 +0.2
stress deoxycholate 0.0125 M +0.3 -0.0 -0.4 +0.2 -0.0
stress bromate 0.05 M +0.2 -0.2 +0.3 +0.1 -0.3
stress DEANONOate 0.000625 M -0.2 -0.3 +0.7 -0.0 -0.0
stress RCH2 defined with Cobalt chloride 0.04 mM -0.1 +0.2 +0.0 +0.4 -0.3
resistance 10% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine +0.0 -0.2 +0.1 +0.5 -0.2
carbon source Ying_sugar7 rep C; time point 2 -0.2 +0.1 +0.3 -0.2 +0.3
resistance 20 mM putrescine +0.1 -0.3 +0.2 +0.4 -0.1
stress sodium iodate 0.005 M +0.2 +0.2 +0.3 -0.5 +0.3
nitrogen source Glucuronamide (N) +0.1 -0.2 +0.1 +0.5 -0.1
stress Phosphomycin 0.004 mg/ml +0.2 +0.1 -0.2 +0.4 +0.1
carbon source D-Galactose (C) +0.1 +0.2 +0.2 +0.3 -0.3
nitrogen source nitrogen source nitrate 5mM +0.1 +0.6 +0.1 -0.2 +0.1
nitrogen source L-Aspartic Acid (N) +0.3 +0.3 -0.2 +0.1 +0.2
carbon source L-Leucine (C) -0.2 +0.1 +0.4 +0.3 +0.1
stress DEANONOate 0.000625 M -0.1 -0.1 +0.6 -0.2 +0.4
nitrogen source L-Aspartic Acid (N) -0.0 +0.4 +0.3 -0.1 +0.1
nitrogen source Glucuronamide (N) +0.1 +0.1 +0.0 +0.1 +0.5
nitrogen source Urea (N) +0.1 +0.2 +0.3 +0.3 +0.1
motility inner cut, LB soft agar motility assay +0.1 +0.3 +0.2 +0.2 +0.3
stress Magnesium chloride 0.125 M +0.1 +0.5 -0.0 +0.4 +0.3
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