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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E2
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500 nt
Pf6N2E2_5145 and Pf6N2E2_5146 are separated by 258 nucleotides
Pf6N2E2_5146 and Pf6N2E2_5147 are separated by 0 nucleotides
Pf6N2E2_5147 and Pf6N2E2_5148 are separated by 120 nucleotides
Pf6N2E2_5148 and Pf6N2E2_5149 are separated by 227 nucleotides
Pf6N2E2_5145 - Mobile element protein, at 5,928,758 to 5,929,705
_5145
Pf6N2E2_5146 - FIG00953066: hypothetical protein, at 5,929,964 to 5,930,260
_5146
Pf6N2E2_5147 - putative exported protein, at 5,930,261 to 5,933,194
_5147
Pf6N2E2_5148 - Methyltransferase (EC 2.1.1.-), at 5,933,315 to 5,934,331
_5148
Pf6N2E2_5149 - Acetyl-coenzyme A synthetase (EC 6.2.1.1), at 5,934,559 to 5,936,496
_5149
Group
Condition
Pf6N2E2
_5145
Pf6N2E2
_5146
Pf6N2E2
_5147
Pf6N2E2
_5148
Pf6N2E2
_5149
carbon source
Ying_Nucleobase14 rep C; time point 2
N.D.
-0.7
-0.1
+0.1
-0.1
stress
RCH2 defined with copper (II) chloride 0.03 mM
N.D.
-0.5
-0.2
-0.2
+0.0
stress
bromate 0.05 M
N.D.
-0.5
+0.1
-0.0
-0.4
carbon source
Ying_Nucleobase14 rep B; time point 2
N.D.
-0.8
-0.1
+0.2
-0.0
nitrogen source
L-Serine (N)
N.D.
-0.2
-0.7
+0.2
+0.1
nitrogen source
nitrogen source nitrite 5mM
N.D.
-0.6
-0.3
+0.2
+0.0
nitrogen source
L-Lysine (N)
N.D.
-0.4
-0.3
+0.1
-0.1
nitrogen source
Parabanic Acid (N)
N.D.
-0.4
-0.3
+0.1
+0.0
nitrogen source
L-Citrulline (N)
N.D.
-0.2
-0.4
+0.2
-0.2
nitrogen source
L-Isoleucine (N)
N.D.
+0.1
-0.6
+0.2
-0.1
carbon source
Ying_Others16 rep A; time point 3
N.D.
-0.6
+0.1
+0.2
-0.2
stress
Aluminum chloride 4 mM
N.D.
-0.0
-0.7
+0.2
+0.1
nitrogen source
Ammonium chloride (N)
N.D.
-0.3
-0.4
+0.2
+0.0
stress
dimethyl sulfone 0.25 M
N.D.
-0.1
-0.7
+0.3
+0.1
nitrogen source
Glucuronamide (N)
N.D.
-0.2
-0.5
+0.3
-0.1
carbon source
D-Galactose (C)
N.D.
-0.2
-0.5
+0.2
+0.1
carbon source
Ying_all64 rep C; time point 3
N.D.
-0.7
+0.1
+0.2
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
-0.6
+0.1
+0.2
+0.1
stress
Zinc chloride 0.0000015625 M
N.D.
-0.4
+0.1
+0.2
-0.2
nitrogen source
nitrogen source nitrate 5mM
N.D.
+0.2
-0.1
-0.5
+0.2
carbon source
D-Galactose (C)
N.D.
-0.1
-0.5
+0.3
+0.0
nitrogen source
L-Serine (N)
N.D.
-0.2
-0.5
+0.4
+0.1
carbon source
D-Glucose (C)
N.D.
+0.2
-0.4
+0.2
-0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
-0.6
+0.1
+0.3
+0.0
stress
deoxycholate 0.0125 M
N.D.
-0.5
+0.3
+0.2
+0.1
stress
molybdate 0.25 M
N.D.
+0.1
-0.4
+0.2
+0.1
carbon source
L-Isoleucine (C)
N.D.
+0.3
-0.3
+0.2
+0.0
stress
DEANONOate 0.000625 M
N.D.
+0.4
-0.2
+0.4
-0.0
stress
Hans 100x vitamins
N.D.
+0.4
+0.1
+0.4
+0.1
motility
inner cut, LB soft agar motility assay
N.D.
+0.1
+0.1
+0.5
+0.2
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