Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_5039 and Pf6N2E2_5040 are separated by 90 nucleotidesPf6N2E2_5040 and Pf6N2E2_5041 are separated by 174 nucleotidesPf6N2E2_5041 and Pf6N2E2_5042 are separated by 128 nucleotidesPf6N2E2_5042 and Pf6N2E2_5043 are separated by 21 nucleotides Pf6N2E2_5039 - endonuclease/exonuclease/phosphatase family protein, at 5,815,913 to 5,816,992 _5039 Pf6N2E2_5040 - FIG00958173: hypothetical protein, at 5,817,083 to 5,817,745 _5040 Pf6N2E2_5041 - Uncharacterized protein conserved in bacteria, at 5,817,920 to 5,818,669 _5041 Pf6N2E2_5042 - FIG00954572: hypothetical protein, at 5,818,798 to 5,819,277 _5042 Pf6N2E2_5043 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 5,819,299 to 5,819,910 _5043
Group Condition Pf6N2E2_5039 Pf6N2E2_5040 Pf6N2E2_5041 Pf6N2E2_5042 Pf6N2E2_5043
carbon source Carbon source Sucrose 5 mM -0.5 -0.5 -0.3 -0.2 N.D.
carbon source Ying_Others16 rep A; time point 3 +0.0 -0.1 -0.8 -0.5 N.D.
carbon source Ying_Others16 rep C; time point 3 -0.1 -0.3 -0.5 -0.3 N.D.
carbon source Ying_AminoAcid20 rep C; time point 2 +0.0 -0.3 -0.5 -0.3 N.D.
stress Rifampicin 0.003 mg/ml -0.2 -0.3 -0.2 -0.4 N.D.
carbon source Ying_Nucleobase14 rep B; time point 3 +0.1 -0.2 -0.5 -0.3 N.D.
motility inner cut, LB soft agar motility assay -0.4 +0.1 -0.1 -0.5 N.D.
carbon source Carbon source Sucrose 10 mM -0.3 -0.3 -0.4 +0.1 N.D.
lb LB no stress 48 hours -0.1 +0.2 -0.8 -0.2 N.D.
stress thiosulfate 0.25 M +0.2 -0.5 -0.0 -0.5 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 +0.2 -0.1 -0.3 -0.5 N.D.
carbon source L-Leucine (C) +0.1 -0.2 -0.6 +0.1 N.D.
stress Nickel (II) chloride 1.5 mM -0.3 -0.1 -0.5 +0.3 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.2 +0.1 -0.5 -0.4 N.D.
carbon source D-Galactose (C) -0.3 -0.4 -0.1 +0.3 N.D.
stress Bile salts 0.0125 M +0.1 -0.5 -0.4 +0.3 N.D.
lb LB no stress 48 hours +0.2 +0.2 -0.5 -0.3 N.D.
stress Hydroxylamine 0.5 M +0.3 -0.8 -0.3 +0.4 N.D.
motility outer cut, LB soft agar motility assay -0.3 -0.1 +0.3 -0.3 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.4 -0.2 +0.4 -0.1 N.D.
motility inner cut, LB soft agar motility assay -0.2 -0.2 +0.6 -0.4 N.D.
stress Nickel (II) chloride 0.0025 M -0.3 +0.1 -0.2 +0.4 N.D.
stress Fluorophosphate 0.125 M +0.2 +0.1 -0.6 +0.3 N.D.
stress Nickel (II) chloride 0.0025 M -0.3 +0.6 -0.3 -0.0 N.D.
stress periodate 0.00125 M -0.0 +0.3 -0.5 +0.4 N.D.
carbon source D-Trehalose (C) +0.3 -0.3 -0.4 +0.5 N.D.
nitrogen source L-Serine (N) +0.3 +0.3 -0.6 +0.1 N.D.
nitrogen source nitrogen source nitrate 20mM -0.4 -0.0 +0.7 -0.0 N.D.
stress Magnesium chloride 0.125 M +0.2 +0.3 +0.2 -0.4 N.D.
stress Choline Lysine 20 mM -0.2 +0.2 +0.3 +0.6 N.D.
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