Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_5017 and Pf6N2E2_5018 are separated by 215 nucleotidesPf6N2E2_5018 and Pf6N2E2_5019 overlap by 21 nucleotidesPf6N2E2_5019 and Pf6N2E2_5020 overlap by 14 nucleotidesPf6N2E2_5020 and Pf6N2E2_5021 are separated by 185 nucleotides Pf6N2E2_5017 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 5,783,463 to 5,784,473 _5017 Pf6N2E2_5018 - tRNA-i(6)A37 methylthiotransferase, at 5,784,689 to 5,786,053 _5018 Pf6N2E2_5019 - hypothetical protein, at 5,786,033 to 5,786,164 _5019 Pf6N2E2_5020 - FIG00955339: hypothetical protein, at 5,786,151 to 5,786,480 _5020 Pf6N2E2_5021 - FOG: TPR repeat, SEL1 subfamily, at 5,786,666 to 5,787,220 _5021
Group Condition Pf6N2E2_5017 Pf6N2E2_5018 Pf6N2E2_5019 Pf6N2E2_5020 Pf6N2E2_5021
nitrogen source nitrogen source nitrate 20mM -0.3 -0.2 -0.3 -1.9 N.D.
nitrogen source nitrogen source nitrite 1mM -0.9 -0.6 -0.2 -0.5 N.D.
carbon source Ying_Others16 rep C; time point 2 -0.4 +0.2 +0.3 -1.6 N.D.
stress L-Lysine 25 mM -0.2 -0.4 -0.1 -0.7 N.D.
stress sodium iodate 0.005 M -1.3 -0.3 -0.1 +0.4 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 3 -0.1 -0.8 +0.1 -0.5 N.D.
stress Nickel (II) chloride 0.0025 M -1.0 -0.4 -0.2 +0.3 N.D.
resistance 50% P. fluorescens FW300-N2E2 spent media from growth in 20 mM putrescine -0.4 +0.1 +0.1 -1.0 N.D.
carbon source Ying_sugar7 rep B; time point 1 -0.4 +0.0 +0.1 -0.9 N.D.
nitrogen source nitrogen source nitrite 5mM -0.6 -0.5 +0.4 -0.3 N.D.
carbon source propionate (C) +0.4 -0.4 -0.2 -0.7 N.D.
carbon source Ying_AminoAcid20 rep C; time point 3 -0.6 -0.4 +0.3 -0.1 N.D.
carbon source Ying_Others16 rep A; time point 1 -0.4 +0.2 +0.3 -0.7 N.D.
carbon source octanoate (C) -0.9 -0.1 +0.0 +0.5 N.D.
stress Cobalt chloride 0.6 mM -1.0 -0.2 +0.3 +0.4 N.D.
carbon source Ying_sugar7 rep B; time point 2 +0.1 +0.4 -0.1 -0.8 N.D.
motility outer cut, LB soft agar motility assay -0.1 +0.5 +0.1 -0.9 N.D.
stress RCH2 defined with copper (II) chloride 0.03 mM -0.7 -0.2 +0.2 +0.4 N.D.
stress Bile salts 0.0125 M +0.1 -0.5 -0.4 +0.6 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -0.5 -0.4 +0.2 +0.5 N.D.
stress deoxycholate 0.0125 M -0.3 -0.5 -0.0 +0.7 N.D.
stress Hydroxylamine 0.5 M -0.8 +0.2 +0.1 +0.6 N.D.
stress Chloramphenicol 0.008 mg/ml +0.4 +0.6 +0.2 -0.5 N.D.
stress Vancomycin 0.24 mg/ml -0.6 +0.6 +0.5 +0.8 N.D.
stress Doxycycline hyclate 0.0001 mg/ml +0.4 +0.9 +0.5 -0.6 N.D.
stress Phosphomycin 0.004 mg/ml -0.6 +1.1 +0.7 +0.2 N.D.
stress Tetracycline 0.0004 mg/ml +0.0 +0.6 +0.4 +0.3 N.D.
stress Rifampicin 0.003 mg/ml +0.5 +0.6 +0.6 -0.0 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM +2.5 -0.5 -0.1 +0.4 N.D.
stress RCH2 defined with Cobalt chloride 0.04 mM +2.6 -0.5 -0.0 +0.4 N.D.
remove
Pf6N2E2_5017
plot		 remove
Pf6N2E2_5018
plot		 remove
Pf6N2E2_5019		 remove
Pf6N2E2_5020
plot		 remove
Pf6N2E2_5021
plot