Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 388 experiments or choose conditions or try the comparative fitness browser

500 ntPf6N2E2_4937 and Pf6N2E2_4938 overlap by 4 nucleotidesPf6N2E2_4938 and Pf6N2E2_4939 are separated by 11 nucleotidesPf6N2E2_4939 and Pf6N2E2_4940 are separated by 1 nucleotidesPf6N2E2_4940 and Pf6N2E2_4941 are separated by 3 nucleotides Pf6N2E2_4937 - FIG00955149: hypothetical protein, at 5,689,423 to 5,691,132 _4937 Pf6N2E2_4938 - FIG00956113: hypothetical protein, at 5,691,129 to 5,691,812 _4938 Pf6N2E2_4939 - alpha-2-macroglobulin domain protein, at 5,691,824 to 5,696,377 _4939 Pf6N2E2_4940 - FIG00954181: hypothetical protein, at 5,696,379 to 5,697,998 _4940 Pf6N2E2_4941 - FIG00638718: hypothetical protein, at 5,698,002 to 5,698,832 _4941
Group Condition Pf6N2E2_4937 Pf6N2E2_4938 Pf6N2E2_4939 Pf6N2E2_4940 Pf6N2E2_4941
carbon source Ying_Nucleobase14 rep B; time point 2 -0.3 -0.4 -0.1 -0.2 -0.1
stress Hydroxylamine 0.5 M -0.1 -0.1 -0.2 -0.1 -0.4
carbon source Ying_Nucleobase14 rep A; time point 3 -0.2 +0.1 -0.3 -0.3 -0.2
carbon source Ying_AminoAcid20 rep B; time point 2 -0.3 -0.3 +0.1 -0.2 -0.2
carbon source Ying_all64 rep C; time point 3 -0.3 -0.0 -0.1 -0.4 -0.0
stress RCH2 defined with Cobalt chloride 0.02 mM +0.1 -0.9 -0.1 +0.1 +0.0
carbon source Ying_Nucleobase14 rep B; time point 1 -0.4 -0.1 +0.1 -0.2 -0.3
carbon source Ying_Others16 rep C; time point 1 -0.2 -0.4 +0.1 +0.0 -0.2
carbon source Ying_Nucleobase14 rep A; time point 2 -0.3 -0.3 +0.1 -0.2 -0.1
carbon source Ying_Nucleobase14 rep C; time point 3 -0.3 +0.2 -0.3 -0.3 +0.0
nitrogen source L-Serine (N) -0.1 -0.1 +0.1 +0.0 -0.6
carbon source Ying_Nucleobase14 rep C; time point 2 -0.3 -0.2 +0.2 -0.2 -0.2
motility inner cut, LB soft agar motility assay +0.1 -0.4 -0.1 -0.0 -0.3
carbon source Ying_Others16 rep A; time point 3 -0.3 +0.1 +0.0 -0.4 -0.1
carbon source Ying_Nucleobase14 rep B; time point 3 -0.3 +0.0 -0.2 -0.3 +0.1
carbon source Ying_Others16 rep B; time point 3 -0.2 +0.2 -0.1 -0.4 -0.1
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.3 -0.2 +0.2 -0.2 -0.1
stress Bile salts 0.0125 M -0.0 +0.4 +0.0 -0.1 -0.6
nitrogen source Gly-Glu (N) +0.0 +0.3 +0.1 -0.2 -0.3
stress deoxycholate 0.0125 M -0.0 +0.3 +0.2 -0.0 -0.4
carbon source Ying_OrganicAcid7 rep B; time point 2 -0.2 +0.2 +0.2 +0.0 -0.3
stress Nickel (II) chloride 1.5 mM -0.2 +0.4 -0.1 -0.1 +0.0
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate A +0.0 +0.4 +0.1 -0.2 -0.2
nitrogen source L-Serine (N) -0.1 +0.4 +0.2 -0.1 -0.2
nitrogen source L-Lysine (N) -0.1 +0.4 +0.1 -0.2 -0.0
carbon source D-Trehalose (C) +0.2 +0.3 +0.1 -0.2 -0.2
stress dimethyl sulfone 0.25 M +0.3 +0.2 +0.1 -0.1 -0.2
nitrogen source Glucuronamide (N) -0.3 +0.3 +0.1 +0.1 +0.2
nitrogen source nitrogen source nitrite 0.5mM +0.2 +0.2 +0.1 -0.2 +0.2
lb LB no stress 24 hours +0.1 +0.5 +0.1 +0.2 -0.1
remove
Pf6N2E2_4937
plot		 remove
Pf6N2E2_4938
plot		 remove
Pf6N2E2_4939		 remove
Pf6N2E2_4940
plot		 remove
Pf6N2E2_4941
plot