Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4932 and Pf6N2E2_4933 are separated by 16 nucleotidesPf6N2E2_4933 and Pf6N2E2_4934 overlap by 4 nucleotidesPf6N2E2_4934 and Pf6N2E2_4935 are separated by 229 nucleotidesPf6N2E2_4935 and Pf6N2E2_4936 are separated by 269 nucleotides Pf6N2E2_4932 - hypothetical protein, at 5,685,709 to 5,685,825 _4932 Pf6N2E2_4933 - Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29), at 5,685,842 to 5,686,729 _4933 Pf6N2E2_4934 - Exodeoxyribonuclease VII small subunit (EC 3.1.11.6), at 5,686,726 to 5,686,968 _4934 Pf6N2E2_4935 - Fic family protein, at 5,687,198 to 5,688,334 _4935 Pf6N2E2_4936 - Probable signal peptide protein, at 5,688,604 to 5,689,392 _4936
Group Condition Pf6N2E2_4932 Pf6N2E2_4933 Pf6N2E2_4934 Pf6N2E2_4935 Pf6N2E2_4936
nitrogen source L-Serine (N) -0.1 N.D. N.D. -1.0 -0.2
stress thiosulfate 0.25 M -0.2 N.D. N.D. -0.8 -0.1
carbon source Ying_Nucleobase14 rep B; time point 1 -0.1 N.D. N.D. -1.0 +0.1
stress DEANONOate 0.000625 M -0.6 N.D. N.D. -0.4 -0.0
stress Nickel (II) chloride 0.0025 M -0.6 N.D. N.D. -0.3 -0.0
carbon source Ying_Nucleobase14 rep C; time point 1 -0.5 N.D. N.D. -0.5 +0.0
nitrogen source nitrogen source nitrate 20mM -0.1 N.D. N.D. -0.7 -0.1
stress Gjerstad humics 0.5 M -0.4 N.D. N.D. -0.4 -0.1
nitrogen source nitrogen source nitrite 1mM -0.1 N.D. N.D. -0.4 -0.3
carbon source Ying_Nucleobase14 rep B; time point 2 -0.2 N.D. N.D. -0.9 +0.3
carbon source Ying_Others16 rep B; time point 2 +0.0 N.D. N.D. -0.8 +0.1
stress Nickel (II) chloride 1.5 mM -0.4 N.D. N.D. -0.4 +0.1
stress DEANONOate 0.000625 M -0.6 N.D. N.D. +0.1 -0.1
carbon source Ying_AminoAcid20 rep C; time point 2 -0.5 N.D. N.D. -0.2 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 2 +0.0 N.D. N.D. -0.8 +0.3
motility inner cut, LB soft agar motility assay -0.2 N.D. N.D. -0.4 +0.2
stress 4-Hydroxyacetophenone 0.00025 M -0.4 N.D. N.D. +0.3 -0.3
nitrogen source Glucuronamide (N) +0.0 N.D. N.D. -0.6 +0.2
stress Aluminum chloride 4 mM +0.3 N.D. N.D. -0.6 -0.0
stress Zinc chloride 0.0000015625 M -0.9 N.D. N.D. +0.4 +0.1
carbon source Ying_Nucleobase14 rep C; time point 2 +0.0 N.D. N.D. -0.6 +0.2
carbon source octanoate (C) +0.4 N.D. N.D. -0.6 -0.1
carbon source Ying_Others16 rep A; time point 1 -0.2 N.D. N.D. +0.6 +0.1
carbon source Ying_all64 rep B; time point 3 -0.0 N.D. N.D. +0.7 +0.1
stress Phosphomycin 0.004 mg/ml +0.7 N.D. N.D. +0.1 -0.0
stress Sisomicin 0.0008 mg/ml +0.5 N.D. N.D. +0.3 +0.0
carbon source Ying_Others16 rep C; time point 1 +0.0 N.D. N.D. +0.7 +0.3
stress Sisomicin 0.0016 mg/ml +0.9 N.D. N.D. +0.1 -0.1
stress Nickel (II) chloride 1 mM +0.1 N.D. N.D. +0.6 +0.2
carbon source octanoate (C) +0.6 N.D. N.D. +0.7 +0.0
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