Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E2

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500 ntPf6N2E2_4833 and Pf6N2E2_4834 are separated by 51 nucleotidesPf6N2E2_4834 and Pf6N2E2_4835 are separated by 35 nucleotidesPf6N2E2_4835 and Pf6N2E2_4836 are separated by 135 nucleotidesPf6N2E2_4836 and Pf6N2E2_4837 are separated by 155 nucleotides Pf6N2E2_4833 - FIG00954311: hypothetical protein, at 5,585,813 to 5,586,778 _4833 Pf6N2E2_4834 - 2-nitropropane dioxygenase (EC 1.13.11.32), at 5,586,830 to 5,587,798 _4834 Pf6N2E2_4835 - Protoporphyrinogen IX oxidase, novel form, HemJ (EC 1.3.-.-), at 5,587,834 to 5,588,265 _4835 Pf6N2E2_4836 - N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38), at 5,588,401 to 5,589,435 _4836 Pf6N2E2_4837 - probable iron binding protein from the HesB_IscA_SufA family, at 5,589,591 to 5,589,941 _4837
Group Condition Pf6N2E2_4833 Pf6N2E2_4834 Pf6N2E2_4835 Pf6N2E2_4836 Pf6N2E2_4837
carbon source Ying_AminoAcid20 rep C; time point 3 +0.1 -0.2 N.D. -1.9 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -0.0 -0.1 N.D. -1.7 N.D.
stress Phosphomycin 0.004 mg/ml +0.0 -0.0 N.D. -1.7 N.D.
carbon source Ying_AminoAcid20 rep B; time point 3 -0.1 -0.2 N.D. -1.0 N.D.
stress Vancomycin 0.24 mg/ml +0.1 -0.7 N.D. -0.7 N.D.
stress Chloride 600 mM -0.1 -0.2 N.D. -0.8 N.D.
carbon source propionate (C) -0.0 +0.0 N.D. -1.0 N.D.
nitrogen source Uridine (N) +0.0 -0.1 N.D. -1.0 N.D.
carbon source Ying_AminoAcid20 rep B; time point 2 -0.4 -0.2 N.D. -0.4 N.D.
stress deoxycholate 0.0125 M -0.4 -0.1 N.D. -0.3 N.D.
nitrogen source Cytidine (N) +0.1 -0.1 N.D. -0.8 N.D.
stress DEANONOate 0.000625 M -0.4 -0.2 N.D. -0.2 N.D.
nitrogen source Cytidine (N) +0.0 +0.1 N.D. -0.9 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.0 -0.2 N.D. -0.6 N.D.
carbon source propionate (C) +0.2 +0.1 N.D. -1.0 N.D.
stress Bile salts 0.0125 M +0.1 +0.1 N.D. -0.7 N.D.
nitrogen source nitrogen source nitrate 5mM +0.2 -0.1 N.D. -0.6 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 -0.2 N.D. -0.5 N.D.
stress dimethyl sulfone 0.25 M -0.2 -0.3 N.D. +0.3 N.D.
stress periodate 0.00125 M +0.3 +0.2 N.D. -0.6 N.D.
vitamin No vitamins t2 +0.1 +0.2 N.D. -0.5 N.D.
motility outer cut, LB soft agar motility assay -0.3 -0.2 N.D. +0.5 N.D.
stress bromate 0.05 M -0.3 -0.1 N.D. +0.4 N.D.
lb LB no stress 48 hours +0.3 +0.3 N.D. -0.2 N.D.
carbon source Ying_sugar7 rep B; time point 2 +0.6 -0.1 N.D. -0.1 N.D.
stress Chlorite 0.00005 M +0.4 +0.5 N.D. -0.1 N.D.
motility inner cut, LB soft agar motility assay +0.5 -0.1 N.D. +0.3 N.D.
nitrogen source L-Lysine (N) +0.4 -0.1 N.D. +0.4 N.D.
carbon source RCH2_defined +0.3 +0.3 N.D. +0.3 N.D.
motility inner cut, LB soft agar motility assay +0.4 +0.0 N.D. +0.8 N.D.
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